160 homologs were found in PanDaTox collection
for query gene Dred_1104 on replicon NC_009253
Organism: Desulfotomaculum reducens MI-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009253  Dred_1104  anti-sigma F factor  100 
 
 
148 aa  306  5.9999999999999995e-83  Desulfotomaculum reducens MI-1  Bacteria  normal  0.860331  n/a   
 
 
-
 
NC_013216  Dtox_2065  anti-sigma regulatory factor, serine/threonine protein kinase  62.5 
 
 
146 aa  178  2e-44  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.000202652  normal 
 
 
-
 
NC_007644  Moth_1497  anti-sigma F factor  61.15 
 
 
148 aa  170  5.999999999999999e-42  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_3441  anti-sigma F factor  56.72 
 
 
145 aa  156  1e-37  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_0862  anti-sigma regulatory factor, serine/threonine protein kinase  52.24 
 
 
142 aa  145  2.0000000000000003e-34  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_0614  anti-sigma F factor  51.85 
 
 
148 aa  142  1e-33  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_1225  putative anti-sigma regulatory factor, serine/threonine protein kinase  47.97 
 
 
148 aa  140  7e-33  Candidatus Desulforudis audaxviator MP104C  Bacteria  hitchhiker  0.00856956  n/a   
 
 
-
 
NC_011898  Ccel_2285  anti-sigma F factor  50.71 
 
 
141 aa  136  8.999999999999999e-32  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_0119  anti-sigma F factor  49.66 
 
 
149 aa  133  9.999999999999999e-31  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_1558  anti-sigma F factor  48.23 
 
 
143 aa  125  2.0000000000000002e-28  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0477  anti-sigma F factor  48.94 
 
 
157 aa  120  5e-27  Clostridium phytofermentans ISDg  Bacteria  normal  0.899963  n/a   
 
 
-
 
NC_008262  CPR_2021  anti-sigma F factor  43.07 
 
 
140 aa  120  7e-27  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_2306  anti-sigma F factor  43.07 
 
 
140 aa  120  8e-27  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_1745  anti-sigma regulatory factor, serine/threonine protein kinase  42.75 
 
 
153 aa  118  1.9999999999999998e-26  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_0373  anti-sigma F factor  45.39 
 
 
146 aa  118  3e-26  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012793  GWCH70_2251  anti-sigma F factor  44.85 
 
 
146 aa  117  3.9999999999999996e-26  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_07010  putative anti-sigma regulatory factor, serine/threonine protein kinase  46.21 
 
 
143 aa  117  7e-26  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_4143  anti-sigma F factor  38.3 
 
 
146 aa  110  9e-24  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.00316995  n/a   
 
 
-
 
NC_005945  BAS3984  anti-sigma F factor  38.3 
 
 
146 aa  110  9e-24  Bacillus anthracis str. Sterne  Bacteria  normal  0.132565  n/a   
 
 
-
 
NC_005957  BT9727_3814  anti-sigma F factor  38.3 
 
 
146 aa  110  9e-24  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK3830  anti-sigma F factor  38.3 
 
 
146 aa  110  9e-24  Bacillus cereus E33L  Bacteria  normal  0.0386677  n/a   
 
 
-
 
NC_007530  GBAA_4295  anti-sigma F factor  38.3 
 
 
146 aa  110  9e-24  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.65439  n/a   
 
 
-
 
NC_011725  BCB4264_A4183  anti-sigma F factor  38.3 
 
 
146 aa  110  9e-24  Bacillus cereus B4264  Bacteria  normal  0.0790038  n/a   
 
 
-
 
NC_011658  BCAH187_A4206  anti-sigma F factor  38.3 
 
 
146 aa  110  9e-24  Bacillus cereus AH187  Bacteria  unclonable  0.00000000134887  n/a   
 
 
-
 
NC_011772  BCG9842_B1055  anti-sigma F factor  38.3 
 
 
146 aa  110  9e-24  Bacillus cereus G9842  Bacteria  normal  normal  0.0411626 
 
 
-
 
NC_011773  BCAH820_4095  anti-sigma F factor  38.3 
 
 
146 aa  110  9e-24  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  3.69426e-22 
 
 
-
 
NC_010184  BcerKBAB4_3904  anti-sigma F factor  38.3 
 
 
146 aa  110  9e-24  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_2772  anti-sigma F factor  38.3 
 
 
146 aa  109  1.0000000000000001e-23  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.0313076  n/a   
 
 
-
 
NC_010718  Nther_1662  putative anti-sigma regulatory factor, serine/threonine protein kinase  38.52 
 
 
146 aa  102  2e-21  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.503488  normal  0.167313 
 
 
-
 
NC_012034  Athe_1681  anti-sigma F factor  46.02 
 
 
154 aa  94  6e-19  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_0911  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.06 
 
 
290 aa  65.9  0.0000000002  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_0179  putative anti-sigma regulatory factor, serine/threonine protein kinase  36.51 
 
 
142 aa  61.6  0.000000003  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_1291  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.1 
 
 
139 aa  59.7  0.00000001  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_3487  serine-protein kinase RsbW  31.11 
 
 
162 aa  58.5  0.00000003  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011831  Cagg_2399  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.66 
 
 
142 aa  57.4  0.00000007  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.477606 
 
 
-
 
NC_009523  RoseRS_0030  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.54 
 
 
144 aa  57  0.00000009  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.786698 
 
 
-
 
NC_007644  Moth_1473  putative anti-sigma regulatory factor (serine/threonine protein kinase)  34.48 
 
 
135 aa  56.2  0.0000001  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.00187817  normal 
 
 
-
 
NC_007492  Pfl01_3135  putative anti-sigma-regulatory factor (Ser/Thr protein kinase)  30.08 
 
 
134 aa  55.5  0.0000002  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.667596 
 
 
-
 
NC_009767  Rcas_4212  putative anti-sigma regulatory factor, serine/threonine protein kinase  30 
 
 
144 aa  55.8  0.0000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.797188  normal  0.229717 
 
 
-
 
NC_010001  Cphy_3799  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.66 
 
 
140 aa  55.1  0.0000003  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.000337486  n/a   
 
 
-
 
NC_009767  Rcas_3168  putative anti-sigma regulatory factor, serine/threonine protein kinase  32.46 
 
 
144 aa  54.3  0.0000006  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.482123  normal 
 
 
-
 
NC_013093  Amir_3742  putative anti-sigma regulatory factor, serine/threonine protein kinase  26.32 
 
 
137 aa  54.3  0.0000006  Actinosynnema mirum DSM 43827  Bacteria  normal  0.943736  n/a   
 
 
-
 
NC_009767  Rcas_4099  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.15 
 
 
147 aa  53.9  0.0000007  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.256347  normal  0.1124 
 
 
-
 
NC_003909  BCE_1085  serine-protein kinase RsbW  26.85 
 
 
160 aa  53.1  0.000001  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_1624  putative anti-sigma regulatory factor, serine/threonine protein kinase  27.69 
 
 
154 aa  52.8  0.000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_2795  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.84 
 
 
139 aa  53.1  0.000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_005957  BT9727_0912  serine-protein kinase RsbW  27.08 
 
 
160 aa  52.4  0.000002  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.0000281084  n/a   
 
 
-
 
NC_006274  BCZK0895  serine-protein kinase RsbW  27.08 
 
 
160 aa  52.4  0.000002  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0902  serine-protein kinase RsbW  29.1 
 
 
160 aa  52.8  0.000002  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.954937  n/a   
 
 
-
 
NC_013739  Cwoe_4484  putative anti-sigma regulatory factor, serine/threonine protein kinase  32.14 
 
 
138 aa  51.2  0.000004  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.292037 
 
 
-
 
NC_009486  Tpet_1429  putative anti-sigma regulatory factor, serine/threonine protein kinase  33 
 
 
321 aa  51.2  0.000004  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_2297  putative anti-sigma regulatory factor, serine/threonine protein kinase  33 
 
 
143 aa  51.6  0.000004  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_010483  TRQ2_1475  putative anti-sigma regulatory factor, serine/threonine protein kinase  33 
 
 
321 aa  51.2  0.000004  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0927  serine-protein kinase RsbW  27.08 
 
 
160 aa  51.2  0.000005  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4271  serine-protein kinase RsbW  26.17 
 
 
160 aa  51.2  0.000005  Bacillus cereus G9842  Bacteria  normal  0.0304057  hitchhiker  0.00223112 
 
 
-
 
NC_007530  GBAA_0991  serine-protein kinase RsbW  27.08 
 
 
160 aa  51.2  0.000005  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_4123  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.69 
 
 
146 aa  51.2  0.000005  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011773  BCAH820_1067  serine-protein kinase RsbW  27.08 
 
 
160 aa  51.2  0.000005  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  4.13388e-38 
 
 
-
 
NC_009012  Cthe_0334  putative anti-sigma regulatory factor, serine/threonine protein kinase  26.92 
 
 
149 aa  51.2  0.000005  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A1032  serine-protein kinase RsbW  26.17 
 
 
160 aa  51.2  0.000005  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_3289  putative anti-sigma regulatory factor, serine/threonine protein kinase  29.51 
 
 
147 aa  51.2  0.000005  Roseiflexus sp. RS-1  Bacteria  normal  0.0615968  normal 
 
 
-
 
NC_011726  PCC8801_4084  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.69 
 
 
146 aa  51.2  0.000005  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_010676  Bphyt_5777  putative anti-sigma regulatory factor, serine/threonine protein kinase  29.51 
 
 
155 aa  51.2  0.000005  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_2452  putative anti-sigma regulatory factor, serine/threonine protein kinase  23.53 
 
 
147 aa  50.8  0.000006  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_3252  putative anti-sigma regulatory factor, serine/threonine protein kinase  28.93 
 
 
139 aa  50.4  0.000007  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_4563  putative anti-sigma regulatory factor, serine/threonine protein kinase  25.89 
 
 
286 aa  50.8  0.000007  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A1158  serine-protein kinase RsbW  27.08 
 
 
160 aa  50.4  0.000007  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0476  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.03 
 
 
134 aa  50.4  0.000008  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013385  Adeg_1812  putative anti-sigma regulatory factor, serine/threonine protein kinase  28 
 
 
151 aa  50.4  0.000008  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_009718  Fnod_0657  signal transduction protein  34 
 
 
309 aa  50.4  0.000009  Fervidobacterium nodosum Rt17-B1  Bacteria  hitchhiker  0.00784458  n/a   
 
 
-
 
NC_010320  Teth514_2146  putative anti-sigma regulatory factor, serine/threonine protein kinase  35.71 
 
 
139 aa  50.1  0.00001  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_3034  putative anti-sigma regulatory factor, serine/threonine protein kinase  26.56 
 
 
155 aa  49.7  0.00001  Chloroflexus aggregans DSM 9485  Bacteria  normal  decreased coverage  0.00000275353 
 
 
-
 
NC_013037  Dfer_1673  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.15 
 
 
139 aa  50.1  0.00001  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.11126 
 
 
-
 
NC_008752  Aave_2972  putative anti-sigma regulatory factor, serine/threonine protein kinase  25.62 
 
 
134 aa  48.9  0.00002  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.672639 
 
 
-
 
NC_009012  Cthe_3187  putative anti-sigma regulatory factor, serine/threonine protein kinase  26.77 
 
 
140 aa  49.7  0.00002  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00310168  n/a   
 
 
-
 
NC_013595  Sros_8976  putative anti-sigma regulatory factor, serine/threonine protein kinase  29.63 
 
 
146 aa  49.3  0.00002  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_0731  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.23 
 
 
139 aa  48.1  0.00004  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.993652  n/a   
 
 
-
 
NC_014165  Tbis_0477  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.33 
 
 
330 aa  47.8  0.00005  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_0139  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.58 
 
 
140 aa  47.8  0.00005  Ruegeria sp. TM1040  Bacteria  normal  0.0189997  normal 
 
 
-
 
NC_009767  Rcas_0675  putative anti-sigma regulatory factor, serine/threonine protein kinase  39.68 
 
 
133 aa  47.4  0.00006  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.769358  normal  0.0108346 
 
 
-
 
NC_009523  RoseRS_0162  putative anti-sigma regulatory factor, serine/threonine protein kinase  39.68 
 
 
133 aa  47.4  0.00007  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_3290  putative anti-sigma regulatory factor, serine/threonine protein kinase  22.73 
 
 
160 aa  47  0.00008  Roseiflexus sp. RS-1  Bacteria  normal  0.018648  normal 
 
 
-
 
NC_009487  SaurJH9_2102  serine-protein kinase RsbW  29.37 
 
 
159 aa  46.6  0.0001  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.178488  n/a   
 
 
-
 
NC_009616  Tmel_0628  signal transduction protein  29 
 
 
307 aa  46.2  0.0001  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_2139  serine-protein kinase RsbW  29.37 
 
 
159 aa  46.6  0.0001  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_4100  putative anti-sigma regulatory factor, serine/threonine protein kinase  24.22 
 
 
154 aa  47  0.0001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.39959  normal  0.110814 
 
 
-
 
NC_009972  Haur_2684  putative anti-sigma regulatory factor, serine/threonine protein kinase  32.63 
 
 
137 aa  46.2  0.0001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_3337  putative anti-sigma regulatory factor, serine/threonine protein kinase  27.34 
 
 
158 aa  46.6  0.0001  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_002976  SERP1678  serine-protein kinase RsbW  26.43 
 
 
159 aa  45.8  0.0002  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_013203  Apar_0915  anti-sigma-factor antagonist  31.01 
 
 
243 aa  45.8  0.0002  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.583996 
 
 
-
 
NC_008255  CHU_3500  anti-sigma regulatory factor  27.41 
 
 
133 aa  46.2  0.0002  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.314034  normal 
 
 
-
 
NC_009441  Fjoh_3135  putative anti-sigma regulatory factor, serine/threonine protein kinase  29.06 
 
 
137 aa  45.8  0.0002  Flavobacterium johnsoniae UW101  Bacteria  normal  0.109754  n/a   
 
 
-
 
NC_009972  Haur_4854  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.87 
 
 
142 aa  45.4  0.0002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013522  Taci_0691  putative anti-sigma regulatory factor, serine/threonine protein kinase  34.72 
 
 
142 aa  45.1  0.0003  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_3281  integral membrane sensor signal transduction histidine kinase  26.36 
 
 
781 aa  45.1  0.0003  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_0109  histidine kinase  32 
 
 
461 aa  45.1  0.0003  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000786251 
 
 
-
 
NC_013501  Rmar_1323  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.1 
 
 
134 aa  44.7  0.0004  Rhodothermus marinus DSM 4252  Bacteria  normal  0.105677  n/a   
 
 
-
 
NC_009675  Anae109_0801  putative anti-sigma regulatory factor, serine/threonine protein kinase  30 
 
 
134 aa  45.1  0.0004  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.0765191  normal  0.0123921 
 
 
-
 
NC_009972  Haur_1623  putative anti-sigma regulatory factor, serine/threonine protein kinase  26.83 
 
 
154 aa  44.7  0.0004  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_5872  histidine kinase  29.37 
 
 
717 aa  44.7  0.0004  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.830849 
 
 
-
 
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