Gene Nther_1662 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1662 
Symbol 
ID6317071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1738995 
End bp1739435 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content34% 
IMG OID642644038 
Productputative anti-sigma regulatory factor, serine/threonine protein kinase 
Protein accessionYP_001917824 
Protein GI188586279 
COG category[T] Signal transduction mechanisms 
COG ID[COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) 
TIGRFAM ID[TIGR01925] anti-sigma F factor 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.503488 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.167313 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACAA CTAATAACTA TATGGAATTA AAAGTATCCA GTAATTCTCA AAATGAATCC 
TTTTGTCGGG TTGTTGTGGC TGCTTTTGTT TCCAGGATAG ACCCGACCAT TGAGGAGATT
AATGATGTTA AAACTGCAGT TAGTGAGGCA GTAACAAACA GTACTATTCA TGGATATCCC
GATGAAATTG GTGAAATAAA GATTATTGCA AAAATTGAAG ACGATGAATT ATTTTTAGAA
ATTCAAGATT ATGGAGTAGG CATTAGCAAC TTGAATAAAG TCAAAGAACC TTTATATACC
ACTAGGCCAG AATTAGAACG TTCGGGAATG GGCTTCACTA TAATGGAAAA TTTTATGGAT
TCTGTGGAGA TCACTTCTAA TTTGAATCAG GGAACAACTG TGAGAATGAA GAAAAAATTT
AGTTCTTCAA TTAAGGAGTA A
 
Protein sequence
MTTTNNYMEL KVSSNSQNES FCRVVVAAFV SRIDPTIEEI NDVKTAVSEA VTNSTIHGYP 
DEIGEIKIIA KIEDDELFLE IQDYGVGISN LNKVKEPLYT TRPELERSGM GFTIMENFMD
SVEITSNLNQ GTTVRMKKKF SSSIKE