| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0915 |
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| Symbol | |
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| ID | 8413785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1024869 |
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| End bp | 1025600 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 645022502 |
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| Product | anti-sigma-factor antagonist |
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| Protein accession | YP_003179935 |
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| Protein GI | 257784718 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) |
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| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.583996 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTATACGC AGCCAAACAT AGCAGTAGTT TCAGTTAATA CTGACCTTGA CGTGAGGGGA
GTCCCGTGCG TGAAGGCCCA GATTGAGCAG CTAATTAACA GCGGCTGTAG AAGAATTGTA
CTGAATATGT CAGAGGTTTC GTATATCGAT TCTTGTGGCA TGGGTTTTAT TGTGTGCGCT
GTCCGTCGCA TGAAGACGCT CGGCGGTCTT ATGAGCCTTA CCAACGTGCA ACCAACGGCG
TTTAAAGCGC TTGTGCGTAT GGGTCTTATT GACTTTGTGC CTATAAGTAC CTGCGCTGCT
AAGTCACGTG TTACTCCGCT TGCACCAGGC ACACATCCGT CGTTTCAGAC AACATTTAGA
GTTGATCCCA ACAAAATGTG CGACGCCCGC TCGAGGGCAA TTGCGCTAAT GAAGACGCTT
CCGTTTACCT CGGATCAAAA ATTTGATATT GAACTTGCAG TTGGCGAAGC TATTGGCAAC
GCTATTGATC ACGCGTGTGA GAAGGGCGTG CTGACCACGG TCTCCGCATA TCCAGATAGA
GTAGTTATTG ACGTTTCGGA TTGTGGTTGC GGCTTTAGTG TTTCTGATGA TGAAGAGCCT
CCTGAGACTG GTCAGTTTGC GGAGCGTGGC CGTGGTGTTA AGTTGATGCG TCTGCTTATG
GATGCTGTGT CTATCCAGGA GAAACCTTCC GGTAATGGCA CCATTGTTCG CCTGGTTAAG
ATGATGAGCT AG
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| Protein sequence | MYTQPNIAVV SVNTDLDVRG VPCVKAQIEQ LINSGCRRIV LNMSEVSYID SCGMGFIVCA
VRRMKTLGGL MSLTNVQPTA FKALVRMGLI DFVPISTCAA KSRVTPLAPG THPSFQTTFR
VDPNKMCDAR SRAIALMKTL PFTSDQKFDI ELAVGEAIGN AIDHACEKGV LTTVSAYPDR
VVIDVSDCGC GFSVSDDEEP PETGQFAERG RGVKLMRLLM DAVSIQEKPS GNGTIVRLVK
MMS
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