Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0657 |
Symbol | |
ID | 5452488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | - |
Start bp | 721042 |
End bp | 721971 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640874398 |
Product | signal transduction protein |
Protein accession | YP_001410169 |
Protein GI | 154249344 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) [COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00784458 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGGAAA TTCTTGAAAA AGTCCAAAAG GTATTTGCTA ACATAAAAGT TGAAGAATTT ATGAATAGAG ATGTTATTTA TGTTAAGCCC GACAGAACGG TTGCTCAAGT TAAAGAAATT CTTAGACTTA AAAGAATTTC AGGTGTTCCC GTTGTTGATG ATGATGGAAA TGTGGTCGGC ATTATAAGTA TAGAAGACAT AATAAAATCC CTTGAAAATG GTACGTTACA TGAGAAAGTA GACAAGCACA TGACTGCTCG AGTAATTTGC TTACATAAAG ATATGACACT TCAAGAAGTA ATAAAACAAT TTGAACGTTA TAAATATGGA CGATTTCCTG TTGTAGACGA TGATGGAAAG CTCGTTGGTA TAGTTACAAA AAACGATATA CTTGCTGCTG TTGCAACAAG ACTTGGATTA TTGTATCTTC ACGATGAACG AAGAAAAGAA GTCCTTGAAG GGGATATGCT TAATCGGTCT TTAATAACAG GTGAAGAACT CAACAAAAAA GGGGCCGATT TCTATTTTAA AATAGATTAC TTTGATGTAA ATCTTGCTGG TATAGGTGCT GCGCAGTTGA AAAAATTCCT TTTGAACAAA AAAGTAAATG AAAATGTTGT GAGAAGAGTT GCTGTTGCAA CTTACGAGGC CGAGACAAAT GTTGTTATAC ATAGTGGAAG TGAAGGCGAA CTTTATTGTT TTATCGCTGA AGATAGAATT ATAGTGAGAG TTGAGGACAA CGGAAAAGGG ATAGAAAATA TAGAACTTGC GATGAAAGAA GGATATTCAA CAGCCCCGGA CTACGTTAGA GAGCTTGGAT TTGGAGCAGG TATGGGACTA CCGAATATGA AGAGATTCTC AGATAAAATG GTGGTGCTTT CGGAGAAAGG GAAAGGTGTA GTTGTTGAGA TGGTTTTTTA TTTGAATTAA
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Protein sequence | MVEILEKVQK VFANIKVEEF MNRDVIYVKP DRTVAQVKEI LRLKRISGVP VVDDDGNVVG IISIEDIIKS LENGTLHEKV DKHMTARVIC LHKDMTLQEV IKQFERYKYG RFPVVDDDGK LVGIVTKNDI LAAVATRLGL LYLHDERRKE VLEGDMLNRS LITGEELNKK GADFYFKIDY FDVNLAGIGA AQLKKFLLNK KVNENVVRRV AVATYEAETN VVIHSGSEGE LYCFIAEDRI IVRVEDNGKG IENIELAMKE GYSTAPDYVR ELGFGAGMGL PNMKRFSDKM VVLSEKGKGV VVEMVFYLN
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