Gene Aave_2972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_2972 
Symbol 
ID4669889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3262132 
End bp3262536 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content70% 
IMG OID639824172 
Productputative anti-sigma regulatory factor, serine/threonine protein kinase 
Protein accessionYP_971313 
Protein GI120611635 
COG category[T] Signal transduction mechanisms 
COG ID[COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.672639 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCGATG ACACCTCGGG CACCCTGCCC CTCGAATCCG AGCAGCACAT CGTGCTGTGC 
CGCCAGGCCG TCCGCACGCT GTGCGGCAGG CTCCGGTTCT CGCTGGTGGA CCAGACCAAG
GTCATCACCG CGGCCAGCGA ACTGTCGCGC AACACCCTGG TCCACGGGGG TGGAGGCCGC
ATGCGCTGGG AACTGCTCGA CCAGGCCGGG CGCTCCGGCC TGCGCATGCA CTTCGAGGAC
GAAGGCCCGG GCATTGCCGA CCTGCAGCTC GCCCTGGCGG ACGGCTGGAC CTCCGGAGGC
GGCATGGGCC TGGGCCTGCC GGGCAGCCGC CGGCTGGTGA ACGACTTCGA CATCCGTACC
GCACCCGGCC AGGGCACCTG CGTGACCATC ACGAAGTGGA AGTGA
 
Protein sequence
MADDTSGTLP LESEQHIVLC RQAVRTLCGR LRFSLVDQTK VITAASELSR NTLVHGGGGR 
MRWELLDQAG RSGLRMHFED EGPGIADLQL ALADGWTSGG GMGLGLPGSR RLVNDFDIRT
APGQGTCVTI TKWK