Gene Ndas_3857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3857 
Symbol 
ID9247728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp4630406 
End bp4630840 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content71% 
IMG OID 
Productputative anti-sigma regulatory factor, serine/threonine protein kinase 
Protein accessionYP_003681760 
Protein GI297562786 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.479572 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCGGA CCTCCGCGGA ACCGATCCAC GTGCCCATCC GCAGGGACAC CGACCTGACC 
GTGGTCCGCC AACAGGTGCG CGCCCTGGCA CAGCAGACCG GATTCGGCCT GGTCCAGCAG
ACCAAGCTCG TGACCGCGGC CAGCGAGCTG GCCCGCAACA CACTCCTGCA CGGCGGGGGC
GGGTCCACCG AGATCCGCGT CGTCCACGGC CAGGCGGGAC AGGGACTGCG CGTGTCCTTC
GTCGACTCCG GGCCGGGAAT CCCCGACGTG GACATGGCCC TGACCGACGG CTACTCCACC
GCGGGCGGCC TGGGCATGGG CCTGAGCGGC TCCAAACGCC TCGTGCAGGA GTTCGAGATC
GAGAACCTCC CCGAGGGAGG GACCAGGGTG ACCATCACCT CCTGGGCCGA CCCCTACGGG
CGCGGAGCCC GATGA
 
Protein sequence
MSRTSAEPIH VPIRRDTDLT VVRQQVRALA QQTGFGLVQQ TKLVTAASEL ARNTLLHGGG 
GSTEIRVVHG QAGQGLRVSF VDSGPGIPDV DMALTDGYST AGGLGMGLSG SKRLVQEFEI
ENLPEGGTRV TITSWADPYG RGAR