97 homologs were found in PanDaTox collection
for query gene Ndas_3856 on replicon NC_014210
Organism: Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014210  Ndas_3856  putative anti-sigma regulatory factor, serine/threonine protein kinase  100 
 
 
349 aa  674    Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.964763  normal  0.561641 
 
 
-
 
NC_010676  Bphyt_5776  putative anti-sigma regulatory factor, serine/threonine protein kinase  36.8 
 
 
330 aa  171  2e-41  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_1674  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.72 
 
 
335 aa  164  3e-39  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.128227 
 
 
-
 
NC_007348  Reut_B4973  ATP-binding protein  36.94 
 
 
348 aa  162  8.000000000000001e-39  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B2489  anti-sigma regulatory factor (Ser/Thr protein kinase and phosphatase)  35.31 
 
 
330 aa  158  1e-37  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008255  CHU_1216  anti-sigma regulatory factor (Ser/Thr protein kinase)  31.39 
 
 
336 aa  155  8e-37  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.470174  normal 
 
 
-
 
NC_009441  Fjoh_3134  putative anti-sigma regulatory factor, serine/threonine protein kinase  28.48 
 
 
337 aa  152  1e-35  Flavobacterium johnsoniae UW101  Bacteria  normal  0.602251  n/a   
 
 
-
 
NC_011757  Mchl_3342  putative anti-sigma regulatory factor, serine/threonine protein kinase  34.82 
 
 
333 aa  151  2e-35  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.50307  normal 
 
 
-
 
NC_011757  Mchl_0509  putative anti-sigma regulatory factor, serine/threonine protein kinase  34.82 
 
 
333 aa  150  2e-35  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_5232  putative anti-sigma regulatory factor, serine/threonine protein kinase  36.2 
 
 
331 aa  150  3e-35  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.604718  normal 
 
 
-
 
NC_013595  Sros_2266  putative anti-sigma regulatory factor, serine/threonine protein kinase  37.24 
 
 
337 aa  146  6e-34  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.178715 
 
 
-
 
NC_013093  Amir_3741  putative anti-sigma regulatory factor, serine/threonine protein kinase  38.71 
 
 
339 aa  143  4e-33  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_3765  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.18 
 
 
343 aa  142  9e-33  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.933404  normal  0.0854229 
 
 
-
 
NC_010622  Bphy_0132  putative anti-sigma regulatory factor, serine/threonine protein kinase  35.81 
 
 
382 aa  140  1.9999999999999998e-32  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_3136  anti-sigma-regulatory factor (Ser/Thr protein kinase and phosphatase)  33.91 
 
 
338 aa  141  1.9999999999999998e-32  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.505866  normal  0.706395 
 
 
-
 
NC_013159  Svir_31990  anti-sigma regulatory factor (Ser/Thr protein kinase)  36.2 
 
 
335 aa  139  7e-32  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.447378  normal  0.128313 
 
 
-
 
NC_009712  Mboo_1495  stage II sporulation E family protein  30.12 
 
 
346 aa  139  8.999999999999999e-32  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.520612  normal  0.134288 
 
 
-
 
NC_010002  Daci_4408  putative anti-sigma regulatory factor, serine/threonine protein kinase  37.11 
 
 
347 aa  138  1e-31  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_2413  anti-sigma regulatory factor, serine/threonine protein kinase and phosphatase  33.12 
 
 
342 aa  135  9e-31  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_2796  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.81 
 
 
360 aa  134  1.9999999999999998e-30  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_2973  anti-sigma regulatory factor, serine/threonine protein kinase and phosphatase  34.46 
 
 
358 aa  132  1.0000000000000001e-29  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.516432 
 
 
-
 
NC_014165  Tbis_0477  putative anti-sigma regulatory factor, serine/threonine protein kinase  32.81 
 
 
330 aa  130  2.0000000000000002e-29  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_0802  putative anti-sigma regulatory factor, serine/threonine protein kinase  35.78 
 
 
335 aa  126  6e-28  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.132982  normal  0.0114408 
 
 
-
 
NC_013061  Phep_2115  Stage II sporulation E family protein  27.73 
 
 
335 aa  124  3e-27  Pedobacter heparinus DSM 2366  Bacteria  normal  normal  0.614697 
 
 
-
 
NC_013385  Adeg_1812  putative anti-sigma regulatory factor, serine/threonine protein kinase  39.53 
 
 
151 aa  83.6  0.000000000000005  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_013158  Huta_0198  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.72 
 
 
356 aa  81.3  0.00000000000002  Halorhabdus utahensis DSM 12940  Archaea  normal  0.0791059  n/a   
 
 
-
 
NC_008044  TM1040_0139  putative anti-sigma regulatory factor, serine/threonine protein kinase  39.26 
 
 
140 aa  75.5  0.000000000001  Ruegeria sp. TM1040  Bacteria  normal  0.0189997  normal 
 
 
-
 
NC_014165  Tbis_0476  putative anti-sigma regulatory factor, serine/threonine protein kinase  37.04 
 
 
134 aa  72.8  0.000000000008  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_2267  putative anti-sigma regulatory factor, serine/threonine protein kinase  38.97 
 
 
133 aa  71.6  0.00000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.144114 
 
 
-
 
NC_010676  Bphyt_5777  putative anti-sigma regulatory factor, serine/threonine protein kinase  44.21 
 
 
155 aa  70.9  0.00000000003  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_009441  Fjoh_3135  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.15 
 
 
137 aa  70.5  0.00000000004  Flavobacterium johnsoniae UW101  Bacteria  normal  0.109754  n/a   
 
 
-
 
NC_009972  Haur_2684  putative anti-sigma regulatory factor, serine/threonine protein kinase  38.6 
 
 
137 aa  69.7  0.00000000008  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_2414  putative anti-sigma regulatory factor, serine/threonine protein kinase  35.94 
 
 
134 aa  69.3  0.00000000009  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_1673  putative anti-sigma regulatory factor, serine/threonine protein kinase  38.68 
 
 
139 aa  67.8  0.0000000002  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.11126 
 
 
-
 
NC_011831  Cagg_0737  putative anti-sigma regulatory factor, serine/threonine protein kinase  37.39 
 
 
133 aa  68.6  0.0000000002  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_007644  Moth_1473  putative anti-sigma regulatory factor (serine/threonine protein kinase)  36.36 
 
 
135 aa  67.8  0.0000000003  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.00187817  normal 
 
 
-
 
NC_013132  Cpin_3766  putative anti-sigma regulatory factor, serine/threonine protein kinase  38.1 
 
 
136 aa  67.8  0.0000000003  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.069662 
 
 
-
 
NC_013522  Taci_0691  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.05 
 
 
142 aa  67.8  0.0000000003  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_0675  putative anti-sigma regulatory factor, serine/threonine protein kinase  39.13 
 
 
133 aa  67.4  0.0000000004  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.769358  normal  0.0108346 
 
 
-
 
NC_009523  RoseRS_0162  putative anti-sigma regulatory factor, serine/threonine protein kinase  39.13 
 
 
133 aa  67  0.0000000005  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_2795  putative anti-sigma regulatory factor, serine/threonine protein kinase  37.31 
 
 
139 aa  66.2  0.0000000007  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_2116  ATP-binding region ATPase domain protein  36.52 
 
 
137 aa  66.2  0.0000000007  Pedobacter heparinus DSM 2366  Bacteria  normal  normal  0.538209 
 
 
-
 
NC_013159  Svir_32000  anti-sigma regulatory factor (Ser/Thr protein kinase)  37.69 
 
 
134 aa  66.2  0.0000000009  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.124407  normal  0.112833 
 
 
-
 
NC_010511  M446_6563  protein serine/threonine phosphatase  38.41 
 
 
197 aa  65.9  0.000000001  Methylobacterium sp. 4-46  Bacteria  normal  0.710712  normal  0.0215921 
 
 
-
 
NC_009523  RoseRS_2297  putative anti-sigma regulatory factor, serine/threonine protein kinase  36.97 
 
 
143 aa  65.1  0.000000002  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_3252  putative anti-sigma regulatory factor, serine/threonine protein kinase  43.75 
 
 
139 aa  63.9  0.000000003  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_008255  CHU_1217  anti-sigma regulatory factor; Ser/Thr protein kinase  34.91 
 
 
141 aa  64.3  0.000000003  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_4854  putative anti-sigma regulatory factor, serine/threonine protein kinase  35.51 
 
 
142 aa  62.4  0.00000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_2412  histidine kinase  34.25 
 
 
603 aa  61.2  0.00000002  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B2488  putative anti-sigma regulatory factor (Ser/Thr protein kinase)  33.08 
 
 
129 aa  61.6  0.00000002  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_3168  putative anti-sigma regulatory factor, serine/threonine protein kinase  35.85 
 
 
144 aa  60.5  0.00000004  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.482123  normal 
 
 
-
 
NC_010622  Bphy_0131  putative anti-sigma regulatory factor, serine/threonine protein kinase  35.19 
 
 
141 aa  58.9  0.0000001  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_3169  protein serine/threonine phosphatase  32.97 
 
 
192 aa  59.3  0.0000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.822146  normal 
 
 
-
 
NC_013093  Amir_3742  putative anti-sigma regulatory factor, serine/threonine protein kinase  35.04 
 
 
137 aa  58.5  0.0000002  Actinosynnema mirum DSM 43827  Bacteria  normal  0.943736  n/a   
 
 
-
 
NC_009523  RoseRS_2296  stage II sporulation E family protein  31.78 
 
 
191 aa  58.5  0.0000002  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_0334  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.71 
 
 
149 aa  58.5  0.0000002  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_3341  putative anti-sigma regulatory factor, serine/threonine protein kinase  42.2 
 
 
134 aa  58.2  0.0000002  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.480344  normal 
 
 
-
 
NC_011757  Mchl_0510  putative anti-sigma regulatory factor, serine/threonine protein kinase  42.2 
 
 
134 aa  58.2  0.0000002  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_0138  hypothetical protein  27.78 
 
 
214 aa  57.8  0.0000003  Ruegeria sp. TM1040  Bacteria  normal  0.0100709  normal 
 
 
-
 
NC_010505  Mrad2831_5233  histidine kinase  32.28 
 
 
638 aa  57  0.0000005  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_4853  protein serine/threonine phosphatase  28.17 
 
 
193 aa  56.6  0.0000007  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B4972  ATP-binding region, ATPase-like  40.86 
 
 
152 aa  56.2  0.0000008  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_1291  putative anti-sigma regulatory factor, serine/threonine protein kinase  26.27 
 
 
139 aa  56.2  0.0000009  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_3343  histidine kinase  34.38 
 
 
632 aa  55.8  0.000001  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010424  Daud_0696  stage II sporulation E family protein  32.78 
 
 
208 aa  55.5  0.000001  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_0508  histidine kinase  33.59 
 
 
632 aa  55.5  0.000002  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_007644  Moth_1472  serine phosphatase  29.85 
 
 
193 aa  55.1  0.000002  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.143457  normal 
 
 
-
 
NC_010505  Mrad2831_5231  putative anti-sigma regulatory factor, serine/threonine protein kinase  41.28 
 
 
134 aa  55.1  0.000002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.388925  normal 
 
 
-
 
NC_014210  Ndas_2171  protein serine/threonine phosphatase  29.87 
 
 
389 aa  54.7  0.000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.529271  hitchhiker  0.000569605 
 
 
-
 
NC_007492  Pfl01_3135  putative anti-sigma-regulatory factor (Ser/Thr protein kinase)  33.9 
 
 
134 aa  54.3  0.000003  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.667596 
 
 
-
 
NC_010511  M446_6564  putative anti-sigma regulatory factor, serine/threonine protein kinase  43.48 
 
 
137 aa  53.5  0.000005  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.019429 
 
 
-
 
NC_013739  Cwoe_3439  putative anti-sigma regulatory factor, serine/threonine protein kinase  37.84 
 
 
136 aa  52.4  0.00001  Conexibacter woesei DSM 14684  Bacteria  normal  0.438455  normal 
 
 
-
 
NC_014210  Ndas_3857  putative anti-sigma regulatory factor, serine/threonine protein kinase  37.12 
 
 
144 aa  51.6  0.00002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.479572 
 
 
-
 
NC_011661  Dtur_0911  putative anti-sigma regulatory factor, serine/threonine protein kinase  29.32 
 
 
290 aa  51.6  0.00002  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_0801  putative anti-sigma regulatory factor, serine/threonine protein kinase  32.41 
 
 
134 aa  50.8  0.00003  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.0765191  normal  0.0123921 
 
 
-
 
NC_011831  Cagg_3251  protein serine/threonine phosphatase  31.38 
 
 
192 aa  50.8  0.00003  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_0803  histidine kinase  31.34 
 
 
718 aa  49.7  0.00007  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.0571523  hitchhiker  0.00843936 
 
 
-
 
NC_013216  Dtox_0179  putative anti-sigma regulatory factor, serine/threonine protein kinase  26.09 
 
 
142 aa  49.3  0.00009  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_0133  histidine kinase  36.52 
 
 
482 aa  48.1  0.0002  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_1558  anti-sigma F factor  28.79 
 
 
143 aa  48.1  0.0002  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_1813  protein serine/threonine phosphatase  26.74 
 
 
203 aa  48.5  0.0002  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_2065  anti-sigma regulatory factor, serine/threonine protein kinase  35.09 
 
 
146 aa  47.8  0.0003  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.000202652  normal 
 
 
-
 
NC_010001  Cphy_3799  putative anti-sigma regulatory factor, serine/threonine protein kinase  26.87 
 
 
140 aa  46.6  0.0006  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.000337486  n/a   
 
 
-
 
NC_009712  Mboo_1494  putative anti-sigma regulatory factor, serine/threonine protein kinase  36.13 
 
 
134 aa  45.8  0.001  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.222585  normal  0.076378 
 
 
-
 
NC_013158  Huta_0197  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.61 
 
 
144 aa  45.4  0.001  Halorhabdus utahensis DSM 12940  Archaea  normal  0.0569328  n/a   
 
 
-
 
NC_013385  Adeg_0862  anti-sigma regulatory factor, serine/threonine protein kinase  34.07 
 
 
142 aa  45.8  0.001  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_3441  anti-sigma F factor  41.07 
 
 
145 aa  45.8  0.001  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_5775  histidine kinase  28.21 
 
 
554 aa  44.7  0.002  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.941039 
 
 
-
 
NC_008346  Swol_0614  anti-sigma F factor  34.25 
 
 
148 aa  45.1  0.002  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_0670  signal transduction histidine kinase, nitrogen specific, NtrB  39.44 
 
 
546 aa  44.7  0.002  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.0451507  normal 
 
 
-
 
NC_010320  Teth514_2146  putative anti-sigma regulatory factor, serine/threonine protein kinase  24.06 
 
 
139 aa  44.7  0.003  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_4409  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.63 
 
 
134 aa  44.3  0.003  Delftia acidovorans SPH-1  Bacteria  normal  0.765938  normal 
 
 
-
 
NC_013757  Gobs_1306  protein serine/threonine phosphatase  27.27 
 
 
406 aa  43.9  0.004  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B2490  histidine kinase  30.56 
 
 
554 aa  43.1  0.007  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_2681  serine phosphatase  24 
 
 
798 aa  43.1  0.007  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_0342  integral membrane sensor signal transduction histidine kinase  32.31 
 
 
334 aa  42.7  0.008  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010718  Nther_0078  stage II sporulation protein E, protein serine/threonine phosphatase  25.14 
 
 
833 aa  42.7  0.009  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
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