73 homologs were found in PanDaTox collection
for query gene Amir_3741 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013093  Amir_3741  putative anti-sigma regulatory factor, serine/threonine protein kinase  100 
 
 
339 aa  663    Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_2266  putative anti-sigma regulatory factor, serine/threonine protein kinase  45.62 
 
 
337 aa  253  5.000000000000001e-66  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.178715 
 
 
-
 
NC_013131  Caci_2796  putative anti-sigma regulatory factor, serine/threonine protein kinase  44.74 
 
 
360 aa  232  6e-60  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0477  putative anti-sigma regulatory factor, serine/threonine protein kinase  46.01 
 
 
330 aa  232  8.000000000000001e-60  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_3342  putative anti-sigma regulatory factor, serine/threonine protein kinase  41.16 
 
 
333 aa  205  9e-52  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.50307  normal 
 
 
-
 
NC_011757  Mchl_0509  putative anti-sigma regulatory factor, serine/threonine protein kinase  41.16 
 
 
333 aa  204  2e-51  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_3136  anti-sigma-regulatory factor (Ser/Thr protein kinase and phosphatase)  36.45 
 
 
338 aa  197  3e-49  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.505866  normal  0.706395 
 
 
-
 
NC_009712  Mboo_1495  stage II sporulation E family protein  36.45 
 
 
346 aa  192  5e-48  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.520612  normal  0.134288 
 
 
-
 
NC_010676  Bphyt_5776  putative anti-sigma regulatory factor, serine/threonine protein kinase  37.39 
 
 
330 aa  191  1e-47  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_2413  anti-sigma regulatory factor, serine/threonine protein kinase and phosphatase  38.39 
 
 
342 aa  191  1e-47  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B4973  ATP-binding protein  38.25 
 
 
348 aa  189  4e-47  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_5232  putative anti-sigma regulatory factor, serine/threonine protein kinase  39.08 
 
 
331 aa  185  9e-46  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.604718  normal 
 
 
-
 
NC_007952  Bxe_B2489  anti-sigma regulatory factor (Ser/Thr protein kinase and phosphatase)  36.65 
 
 
330 aa  183  3e-45  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_2973  anti-sigma regulatory factor, serine/threonine protein kinase and phosphatase  34.52 
 
 
358 aa  174  1.9999999999999998e-42  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.516432 
 
 
-
 
NC_013037  Dfer_1674  putative anti-sigma regulatory factor, serine/threonine protein kinase  32.93 
 
 
335 aa  174  1.9999999999999998e-42  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.128227 
 
 
-
 
NC_009675  Anae109_0802  putative anti-sigma regulatory factor, serine/threonine protein kinase  39.88 
 
 
335 aa  169  6e-41  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.132982  normal  0.0114408 
 
 
-
 
NC_010622  Bphy_0132  putative anti-sigma regulatory factor, serine/threonine protein kinase  35.34 
 
 
382 aa  169  6e-41  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_2115  Stage II sporulation E family protein  31.17 
 
 
335 aa  160  2e-38  Pedobacter heparinus DSM 2366  Bacteria  normal  normal  0.614697 
 
 
-
 
NC_008255  CHU_1216  anti-sigma regulatory factor (Ser/Thr protein kinase)  30.46 
 
 
336 aa  158  2e-37  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.470174  normal 
 
 
-
 
NC_010002  Daci_4408  putative anti-sigma regulatory factor, serine/threonine protein kinase  35.22 
 
 
347 aa  156  4e-37  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_009441  Fjoh_3134  putative anti-sigma regulatory factor, serine/threonine protein kinase  29.27 
 
 
337 aa  153  5e-36  Flavobacterium johnsoniae UW101  Bacteria  normal  0.602251  n/a   
 
 
-
 
NC_013132  Cpin_3765  putative anti-sigma regulatory factor, serine/threonine protein kinase  31 
 
 
343 aa  150  4e-35  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.933404  normal  0.0854229 
 
 
-
 
NC_014210  Ndas_3856  putative anti-sigma regulatory factor, serine/threonine protein kinase  38 
 
 
349 aa  141  1.9999999999999998e-32  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.964763  normal  0.561641 
 
 
-
 
NC_013159  Svir_31990  anti-sigma regulatory factor (Ser/Thr protein kinase)  34.66 
 
 
335 aa  137  3.0000000000000003e-31  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.447378  normal  0.128313 
 
 
-
 
NC_013158  Huta_0198  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.54 
 
 
356 aa  114  2.0000000000000002e-24  Halorhabdus utahensis DSM 12940  Archaea  normal  0.0791059  n/a   
 
 
-
 
NC_013385  Adeg_1812  putative anti-sigma regulatory factor, serine/threonine protein kinase  36.92 
 
 
151 aa  86.7  6e-16  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_4853  protein serine/threonine phosphatase  30.16 
 
 
193 aa  84.3  0.000000000000003  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_3251  protein serine/threonine phosphatase  36.31 
 
 
192 aa  83.2  0.000000000000006  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_3169  protein serine/threonine phosphatase  31.22 
 
 
192 aa  72.8  0.000000000008  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.822146  normal 
 
 
-
 
NC_009523  RoseRS_2296  stage II sporulation E family protein  31.52 
 
 
191 aa  71.2  0.00000000002  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_007644  Moth_1472  serine phosphatase  32.99 
 
 
193 aa  70.9  0.00000000003  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.143457  normal 
 
 
-
 
NC_011831  Cagg_0737  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.93 
 
 
133 aa  68.9  0.0000000001  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_3252  putative anti-sigma regulatory factor, serine/threonine protein kinase  37.39 
 
 
139 aa  68.2  0.0000000002  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_6563  protein serine/threonine phosphatase  31.67 
 
 
197 aa  68.2  0.0000000002  Methylobacterium sp. 4-46  Bacteria  normal  0.710712  normal  0.0215921 
 
 
-
 
NC_008044  TM1040_0139  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.71 
 
 
140 aa  67  0.0000000005  Ruegeria sp. TM1040  Bacteria  normal  0.0189997  normal 
 
 
-
 
NC_009972  Haur_4854  putative anti-sigma regulatory factor, serine/threonine protein kinase  38.46 
 
 
142 aa  65.9  0.0000000009  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_1473  putative anti-sigma regulatory factor (serine/threonine protein kinase)  32.54 
 
 
135 aa  65.5  0.000000001  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.00187817  normal 
 
 
-
 
NC_010511  M446_6564  putative anti-sigma regulatory factor, serine/threonine protein kinase  44 
 
 
137 aa  63.9  0.000000004  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.019429 
 
 
-
 
NC_009523  RoseRS_2297  putative anti-sigma regulatory factor, serine/threonine protein kinase  35.54 
 
 
143 aa  62  0.00000001  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_0675  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.04 
 
 
133 aa  62.4  0.00000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.769358  normal  0.0108346 
 
 
-
 
NC_009523  RoseRS_0162  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.04 
 
 
133 aa  61.6  0.00000002  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_3168  putative anti-sigma regulatory factor, serine/threonine protein kinase  35.14 
 
 
144 aa  60.5  0.00000004  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.482123  normal 
 
 
-
 
NC_007952  Bxe_B2488  putative anti-sigma regulatory factor (Ser/Thr protein kinase)  31.13 
 
 
129 aa  59.7  0.00000007  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_5777  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.19 
 
 
155 aa  58.2  0.0000002  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_32000  anti-sigma regulatory factor (Ser/Thr protein kinase)  36.96 
 
 
134 aa  56.6  0.0000005  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.124407  normal  0.112833 
 
 
-
 
NC_013132  Cpin_3766  putative anti-sigma regulatory factor, serine/threonine protein kinase  32.41 
 
 
136 aa  57  0.0000005  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.069662 
 
 
-
 
NC_013739  Cwoe_3439  putative anti-sigma regulatory factor, serine/threonine protein kinase  36.63 
 
 
136 aa  56.6  0.0000007  Conexibacter woesei DSM 14684  Bacteria  normal  0.438455  normal 
 
 
-
 
NC_009972  Haur_2684  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.48 
 
 
137 aa  55.8  0.000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013158  Huta_0197  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.1 
 
 
144 aa  53.9  0.000004  Halorhabdus utahensis DSM 12940  Archaea  normal  0.0569328  n/a   
 
 
-
 
NC_009523  RoseRS_0030  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.83 
 
 
144 aa  53.9  0.000004  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.786698 
 
 
-
 
NC_014210  Ndas_3857  putative anti-sigma regulatory factor, serine/threonine protein kinase  35.58 
 
 
144 aa  53.5  0.000006  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.479572 
 
 
-
 
NC_008044  TM1040_0138  hypothetical protein  25 
 
 
214 aa  53.1  0.000007  Ruegeria sp. TM1040  Bacteria  normal  0.0100709  normal 
 
 
-
 
NC_009767  Rcas_4212  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.67 
 
 
144 aa  51.2  0.00002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.797188  normal  0.229717 
 
 
-
 
NC_009441  Fjoh_3135  putative anti-sigma regulatory factor, serine/threonine protein kinase  38.03 
 
 
137 aa  50.8  0.00003  Flavobacterium johnsoniae UW101  Bacteria  normal  0.109754  n/a   
 
 
-
 
NC_013131  Caci_2795  putative anti-sigma regulatory factor, serine/threonine protein kinase  34.31 
 
 
139 aa  50.4  0.00004  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008346  Swol_0614  anti-sigma F factor  28.68 
 
 
148 aa  49.3  0.0001  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_0696  stage II sporulation E family protein  32.56 
 
 
208 aa  48.5  0.0002  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0476  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.48 
 
 
134 aa  48.1  0.0002  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_2116  ATP-binding region ATPase domain protein  26.61 
 
 
137 aa  46.6  0.0005  Pedobacter heparinus DSM 2366  Bacteria  normal  normal  0.538209 
 
 
-
 
NC_013739  Cwoe_3440  protein serine/threonine phosphatase  30.99 
 
 
222 aa  47  0.0005  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_010718  Nther_0092  putative anti-sigma regulatory factor, serine/threonine protein kinase  27.42 
 
 
144 aa  46.2  0.0007  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.305697  hitchhiker  0.00140915 
 
 
-
 
NC_013037  Dfer_1673  putative anti-sigma regulatory factor, serine/threonine protein kinase  25.64 
 
 
139 aa  46.2  0.0008  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.11126 
 
 
-
 
NC_013216  Dtox_2065  anti-sigma regulatory factor, serine/threonine protein kinase  28.15 
 
 
146 aa  45.4  0.001  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.000202652  normal 
 
 
-
 
NC_009675  Anae109_0801  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.68 
 
 
134 aa  45.4  0.001  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.0765191  normal  0.0123921 
 
 
-
 
NC_008255  CHU_1217  anti-sigma regulatory factor; Ser/Thr protein kinase  28 
 
 
141 aa  44.7  0.002  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_011661  Dtur_0911  putative anti-sigma regulatory factor, serine/threonine protein kinase  25.2 
 
 
290 aa  45.1  0.002  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_2414  putative anti-sigma regulatory factor, serine/threonine protein kinase  35.78 
 
 
134 aa  45.1  0.002  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_0731  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.71 
 
 
139 aa  44.3  0.003  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.993652  n/a   
 
 
-
 
NC_013093  Amir_3742  putative anti-sigma regulatory factor, serine/threonine protein kinase  29.69 
 
 
137 aa  43.5  0.005  Actinosynnema mirum DSM 43827  Bacteria  normal  0.943736  n/a   
 
 
-
 
NC_009718  Fnod_0317  stage II sporulation E family protein  24.4 
 
 
379 aa  43.1  0.007  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_5233  histidine kinase  31.09 
 
 
638 aa  43.1  0.008  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_0133  histidine kinase  31.19 
 
 
482 aa  42.7  0.009  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_0179  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.47 
 
 
142 aa  42.7  0.01  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>