| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2681 |
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| Symbol | |
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| ID | 4808852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 3164153 |
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| End bp | 3166549 |
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| Gene Length | 2397 bp |
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| Protein Length | 798 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640108099 |
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| Product | serine phosphatase |
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| Protein accession | YP_001039073 |
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| Protein GI | 125975163 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | [TIGR02865] stage II sporulation protein E |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGACAC AAATTGTTCC GTATCAAAAA AACAGTATTT TGGAAAGAAT GCATGGAAAA
ACGAGGGGAG GAATTTCAGC CGGACTTGCA ATTTCAAAAA ACAATATTAT ATTCTTTTTG
CTAAGTTTCC TCCTTGGCAG AGTGTCTCTA TTTGGAGGTC TTATGCCTTT TGGACTTGCT
TTTTATGCGG CGGCAATCAC ATCAAATGCA AACAGATTTC TGACAGCTGC GGCAGTAGTA
GCCGGAATGG CAACGGGCGG AGCCCGGACG GAGCTTTATA CGGCATTGAC TTTTATGGTT
CTTTTCAGTT TGTTCACTAA ATTATTAAAA AATTCAGCGG AAAAAGAAAA TCTCAAACAT
GCAGCTTTAG GCTTTGTAAG TGCTGCTGTT CCCCAGATTA TAATGGCGTG GCTGCAGGGA
TTTTTAATGT ATGATGTTTT AATGGCACTG CTTAACAGTG TGCTGGTATT TTCAATGATA
TACATATTCA GGCGCGGCAT GCCTTTAATA GAAGGAACAA AGAAAAAAGG TGTCATTGGC
AATGAAGAAA TGATAAGTGT TGCAATGATG GCGGCCATTT CCCTGTCGGG ATTGGGGGGA
ATAAATATTT TTGGCACATC TGTTCTTAAT GCATTGGGTA TTCTGGCGGT AATGCTCTTA
AGCTTCAAAG CCGGCCCGGG AGTGGGAGCG GCTGTCGGAG TGATTGTGGG TTTGGTAATC
AATTTAAGCG GACCTGCAAC ACCACTGGTT ATAGGTTCCT ATGCTTTCTG CGGTTTGATG
GCCGGTTTGT TCAGAAATAT CGGCAAAATG GGAACAGCTG TGGGTTTTAT ACTTGCCAAT
GCAGTGCTGA CTTTATATAT AAACGGTTCA ACGGAAGTGA TTATACACAT CAAAGATATA
ATTCCCGCCG CACTTATGTT TGTGATTGTT CCGAAAAAAG TGATAGAAGA CGTGTTTGGA
GCATTTTCAC AGGAGACGGA AGCTTCAAAA GACAAGCCCG CTTACAGCCG GCGTATAAAG
GAACTTACGG TGGAAAGGCT GAATAATTTT GCAAGGGCCT TTGAGGAACT TTCCAAAACT
TTCAGCGAGA TTTCCCAAAC CAAAATAGTT GCCGGCAAGC AGGATATTTC TTCTTTGTTT
GACAGAGTGG CGGACAAGGT GTGCAAGGAT TGCAGCCTGT GTCTCCACTG CTGGGACAGG
AATTTCTACA ATACATATCA GGTGATGTTT AAAATAGTTG AGAATCTGGA GAAAAAGGGA
TGGATTGATG AGAGTGACAT ACCGGAGTAT TTCATGGAAA GATGTGAAAG AATAGGGGAG
TTTGTAAGGC AGGTAAACAA TGTATATGAA CTGTTTAAAG TGGACATGGT GTGGAAAAAC
AGAATAGGAG AGAGCAGAGG GCTTATATCG CAGCAACTGG ACGGGCTGGC AAAGGTTATA
TTAAATCTGG CCGTTGAAAT TGACGGTGAG ATTAAATTTA AGAGCGATAT GGAGGATGTA
TTGCTTTTCG AGCTTAGGAA TAAAGGAATA AAAGTAAATG ATGTGGTGGT GTGTGAAAAC
AAATGGGGTA AATATGAAGT AAACATTTTT CATAATGGAT GCGCGGGAGC AAACAAATGT
CTTGATTATA TTGAAGAAGT GGCATCTTCT GTATTGGGAA GGCGAATGGT ACGGGGTAAA
AATGAATGTA TACATAATTA CAGAACGGGT ATGTGCAATT TAAAACTGGT TGAGGCGGAA
GTTTTCAGCA TAACAACCGG TATGGCCAGA AGTTCAAAGT ATGAAAACCA GGTTTCCGGA
GACAGTTATT CCTTTATGAA CACCGGCTCG GGAAAGTATA TTCTGGCTTT GAGCGACGGT
ATGGGCACGG GACAGGCGGC GTCCAGCCAA AGCAAGGTTG CCATAAGTCT GCTGGAGCAG
TTTATGGAAA CAGGTTTTGA TCAGGATACC GCAATAAAGC TCATAAATTC AATACTTGTA
CTAAAATCCG ATGATGACTC CTTTGCCACC ATTGACCTTT CGGCTATAGA TTTGTATGAC
GGAAAAATTG AATTTGTGAA AATTGGCGCC GCTCCAACCT TTATAAAGAG ACAAAACAAG
GTGGAGGTCG TAAAAACAGT ATCTCTTCCG GCAGGAATAC TCAGTGATAT AGATACGGAG
CTCGTTTCCA AAAATGCGGA CAACGGGGAT TTTATAATCA TGGTTACTGA CGGAATTATT
GATTCTTTCA AGCTTGAAGA AGGCGGGGAG CAGAATTTGA TAAAATTTAT TGAGGATATT
GACAGCATAA ATCCCCAGGG AATTGCGGAT CTTATATTGG CCGAGGCCTG CTCAAAGTGC
AAGGACAAGC CTGTCGACGA TATGACGGTG CTGGTGGCAA AGGTATGGAA GCGATAA
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| Protein sequence | MKTQIVPYQK NSILERMHGK TRGGISAGLA ISKNNIIFFL LSFLLGRVSL FGGLMPFGLA
FYAAAITSNA NRFLTAAAVV AGMATGGART ELYTALTFMV LFSLFTKLLK NSAEKENLKH
AALGFVSAAV PQIIMAWLQG FLMYDVLMAL LNSVLVFSMI YIFRRGMPLI EGTKKKGVIG
NEEMISVAMM AAISLSGLGG INIFGTSVLN ALGILAVMLL SFKAGPGVGA AVGVIVGLVI
NLSGPATPLV IGSYAFCGLM AGLFRNIGKM GTAVGFILAN AVLTLYINGS TEVIIHIKDI
IPAALMFVIV PKKVIEDVFG AFSQETEASK DKPAYSRRIK ELTVERLNNF ARAFEELSKT
FSEISQTKIV AGKQDISSLF DRVADKVCKD CSLCLHCWDR NFYNTYQVMF KIVENLEKKG
WIDESDIPEY FMERCERIGE FVRQVNNVYE LFKVDMVWKN RIGESRGLIS QQLDGLAKVI
LNLAVEIDGE IKFKSDMEDV LLFELRNKGI KVNDVVVCEN KWGKYEVNIF HNGCAGANKC
LDYIEEVASS VLGRRMVRGK NECIHNYRTG MCNLKLVEAE VFSITTGMAR SSKYENQVSG
DSYSFMNTGS GKYILALSDG MGTGQAASSQ SKVAISLLEQ FMETGFDQDT AIKLINSILV
LKSDDDSFAT IDLSAIDLYD GKIEFVKIGA APTFIKRQNK VEVVKTVSLP AGILSDIDTE
LVSKNADNGD FIIMVTDGII DSFKLEEGGE QNLIKFIEDI DSINPQGIAD LILAEACSKC
KDKPVDDMTV LVAKVWKR
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