Gene Mchl_3343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_3343 
Symbol 
ID7117111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp3532016 
End bp3533914 
Gene Length1899 bp 
Protein Length632 aa 
Translation table11 
GC content70% 
IMG OID643526089 
Producthistidine kinase 
Protein accessionYP_002422103 
Protein GI218531287 
COG category[T] Signal transduction mechanisms 
COG ID[COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase)
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTGGA CGCTGCTCAC CAGCCCCGTC GAGCACGAGG ACGACATCGT CACGGTGCGC 
CAGCGCGTGC GCAGCCTGGC CGAGCGCCTC GGCTTCGAGG TCCAGGACCA GACCCGCATC
GCCACGGCGG TTTCCGAGAT CGCGCGCAAC GCCTACGGCT ACGCCGGCGG CGGCCGGGTC
GAGTACGGCC TCGAACAGGA AGGGGGCGGG CAATCCCTGG TGATCAGGAT CAGCGACAAG
GGACCGGGCA TCGCCGAGCT CGACGCCATC CTGGAAGGCC GCTACCGGTC CACGACAGGG
CTCGGCATCG GCATCACCGG CTCCCGCCGC CTGATGGACC ACTTCGAGAT CGAGACTGCG
GTCGGCCAGG GTACCGTCGT GACCTTCGGG AAGCGGCTGC CGTCCGGCGT CGAGACCTTC
ACGGGCCCGC GCCTGGCCAA GCTCGCCGAG GCCGTCGCCC GCTCCCGGAC AGAGGACCCG
CTGGTCGCCC TGCGCGACCA GAACCGCGAG CTTATGCGGA GCCTGGCCGA ACTCGCCGAG
CGGCAGGACG AGGCCGAGCG CCTGAACCGG GAGCTCGCCG AGACGAACAG GGGCGTCGTG
GCGCTCCATG CCGAGCTTGA GGACCAGGCC GCGCAGTTGC GCGAGGCCGG CGCGTCGCTA
GAAAGTCAGG TGGCGGCGCG CACGGCGGAG CTCGCCGAGG CCAACGCACG CCTGCTCGCC
GAGGCGGTCG AGCGCGAGCG TACGGAGGAG GCTCTGCGGC AGGCCCAGAA GCTGGAGGCC
GTCGGGCAAC TGACCGGCGG CGTCGCGCAC GACTTCAACA ACCTGCTGAC CGTCATCAAG
TCGTCGACGG ACCTGCTCAA GCGGCCCGAC CTCGCGCCCG AGCGACGCGA GCGCTACGTC
GCGGCCATCT CCGACACGGT GGATCGGGCC GCCAAGCTGA CCGGGCAACT GCTGGCCTTC
GCCCGTCGCC AGTCCCTGAA GCCGGAGGTG TTCGCCGCCT GCGACAGCGT GCGGGCGCTC
TCCGACATGA TGGGAACGCT CACCGGCTCG TGCATCCGCA TCGTCACGGA CCTGCCGGAG
GGCACCTGCT TCGTGCATGC CGACCAGAGC CAGTTCGACA CCGCGCTGGT CAACATGGCG
GTGAACGCCC GCGACGCCAT GGAGGGCGAA GGCCAGCTCA CCATCCGTGT GCTGGGTGTA
GAGGGCATGC CCCCGATCCG AGGCCAGGCA GCCGTGGAGG GGCCGTACGT CGCGGTCTCG
ATCAGCGACA CCGGCGTGGG AATCCCCGGG GACCGGTTAG AGCGGATCTT CGAGCCGTTC
TTTACCACCA AAGGGGTGGG TCAGGGCACC GGGCTCGGCC TGAGCCAGGT CTTCGGCTTC
GCCAAGCAGT CGGGCGGCGA GGTGACGGTG GCGAGCGGGC TCGGGCACGG CGCCACCTTC
ACGATGTACC TCCCGCGCGT GCCTGAGGTG GAGAGGGAGA CGGACAACGA GCCCGAGCCG
CTCGTCGACG GCCACGGCAC CTGCGTGCTG GTGGTCGAGG ACAACGCAGA GGTCGGCACG
TTCGCCGTGC AGACGCTGAC CGACCTCGGC TACGTGCCGG TGCTCGCCAA CAATGCCGAG
GAGGCACTTG CGGAACTCGC GCGGGACGCC GACCGGTTCG ACGTGGTCTT CTCGGACGTG
GTCATGCCGG GCATGAACGG CCTCGACCTC GCGCGGCGCA TCCGCGAGGA GCACCACGAC
CTGCCGGTGC TGCTGGCCTC CGGCTACAGC CACGTGATGG CGCAGAACGG CACCTACGGG
TTCGAGCTGC TGCACAAGCC CTACTCGGTC GAGCAGCTCT CGCGCCTGCT GCGCAAAGTC
GCCACGTGGC AGCGCCGCAA ACGTATCATC AGCCTGTAG
 
Protein sequence
MKWTLLTSPV EHEDDIVTVR QRVRSLAERL GFEVQDQTRI ATAVSEIARN AYGYAGGGRV 
EYGLEQEGGG QSLVIRISDK GPGIAELDAI LEGRYRSTTG LGIGITGSRR LMDHFEIETA
VGQGTVVTFG KRLPSGVETF TGPRLAKLAE AVARSRTEDP LVALRDQNRE LMRSLAELAE
RQDEAERLNR ELAETNRGVV ALHAELEDQA AQLREAGASL ESQVAARTAE LAEANARLLA
EAVERERTEE ALRQAQKLEA VGQLTGGVAH DFNNLLTVIK SSTDLLKRPD LAPERRERYV
AAISDTVDRA AKLTGQLLAF ARRQSLKPEV FAACDSVRAL SDMMGTLTGS CIRIVTDLPE
GTCFVHADQS QFDTALVNMA VNARDAMEGE GQLTIRVLGV EGMPPIRGQA AVEGPYVAVS
ISDTGVGIPG DRLERIFEPF FTTKGVGQGT GLGLSQVFGF AKQSGGEVTV ASGLGHGATF
TMYLPRVPEV ERETDNEPEP LVDGHGTCVL VVEDNAEVGT FAVQTLTDLG YVPVLANNAE
EALAELARDA DRFDVVFSDV VMPGMNGLDL ARRIREEHHD LPVLLASGYS HVMAQNGTYG
FELLHKPYSV EQLSRLLRKV ATWQRRKRII SL