Gene Huta_0197 details

Gene Information

• Locus tag: Huta_0197
• ID: 8382459
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhabdus utahensis DSM 12940
• Kingdom: Archaea
• Replicon accession: NC_013158
• Strand: +
• Start bp: 193769
• End bp: 194203
• Gene Length: 435 bp
• Protein Length: 144 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 644971255
• Product: putative anti-sigma regulatory factor, serine/threonine protein kinase
• Protein accession: YP_003129118
• Protein GI: 257051285
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase)

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.0569328
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATGAGA CGGGCTCGCT CCGGGAGGAC GTCACAGTCA GACGGTCGGG CGAGCTACAG 
CTCGGTGCCG AGGACCACGT CCTGCGAGCA CGCCAGCGGG CACGGGAGGT CGCCGAGAGC 
GAAGGCTTTT CGATCACTGA CGTCACCCGG ATCGTCACGG CCGTCTCCGA ACTCGCCCGG 
AACATCCATC TCTATGCCGG TGATGGCACG ATGAGCTGGC GCGTTCTCGA GGACGGCGAT 
CGAGACGGTC TGGAGATCAC GTTCGACGAC GACGGTCCCG GAATCGACGA CGTCGAGGGC 
GTCCTGGCCG CCACGCACTC GACATCCGAC GGAATGGGCC GCGGAATCCA GGGAACGCGG 
AAGTTGATGG ACGAGTTCTG GCTGTCTTCG AGTACCGATA CCGGGACGAC CGTCACCATC 
AGGAAGTGGC AGTGA 

 

Protein sequence

MNETGSLRED VTVRRSGELQ LGAEDHVLRA RQRAREVAES EGFSITDVTR IVTAVSELAR 
NIHLYAGDGT MSWRVLEDGD RDGLEITFDD DGPGIDDVEG VLAATHSTSD GMGRGIQGTR 
KLMDEFWLSS STDTGTTVTI RKWQ