| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1495 |
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| Symbol | |
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| ID | 5410415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 1550485 |
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| End bp | 1551525 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640868730 |
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| Product | stage II sporulation E family protein |
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| Protein accession | YP_001404656 |
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| Protein GI | 154151038 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.520612 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.134288 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGATGA ACGGGATGAA GTGCATCCAT ATTGGGGAGA TGAGCGGTAT TGTCGAAGCC
CGGCAGACAG CGATGAATTT CTGCAAGACA AAGGGATTCA GTGAGGTCCT TTCCGGTAAC
GTTTCCCTCA TCGTGACGGA ACTCGCTACA AACCTCGTCA AACATGCCGG TTCGGGAGAA
CTTCTTATTC GCTCCTGTAC CGAAGGAGAT GTTTCCGGAA TCGAGTGCCT CGCGCTTGAC
CGGGGCATGG GGATCACAGA TATCGGCGGA AGCCTGCGGG GCAAATATCC TGCCACTGCT
GGTAAGGAGA CCGGCCTTAT GGCAGTCCGC CGTCTCTCTT CCCTGTTTGA TCTCTATTCC
ATCCCGGAGA AGGGGACGGC CGTCCTCTCC CGGATCGAAA CCAGATCTCC TGAACCAGTG
TCCGATCCAC CGCACCCCCT GTGCTCAACC CGACCCGAGG TCGGCGTTGT TTGTCTTCCA
CTCGTGCCGG ATGAACCCTG CGGCGACGGA TGGGAGGTGA TCCGGTCGGA GAACAGAACG
GTAATCCTTG TTATCGACGG ACTGGGTCAT GGACCGGAAG CCTCGAAAGT TCAGGTCGAA
GCCATCAGGG TCTTCCGGAA GAACCCGGCG GGTGAACCGG TGGAAATACT CAGGAATCTC
CACGCTGCAC TCAGGAACAC CCGAGGGGGT GTCGCGGCGA TTGCCGCTAT CGATGAGGAG
CGAGGCAGGG TCACGTATAC AGGCGCCGGC AATATTTCCG GCCGGATCAT CACCGGTCAT
GTTACCAATA AAATGGTTTC TCTGAGCGGA ACTGTAGGTG ACCAGATCAG GCAATTCAGT
GAGTTCTCGT ATCCCTGGGT AACGGAGGCT CTCCTGATTA TGTACTCCGA TGGGCTCACC
ATGCAGTGGG ATCTTGAGGA TTACCCGGGA CTCGAGCGAA AGCACCCGGC ACTCATTGCC
GGTGTTCTGT ACCGGGATCA TACGCGGGGA ACGGATGATG TGACGGTCCT TGCCGTAAAA
CTCGTCGGGG AGACTTCATG A
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| Protein sequence | MAMNGMKCIH IGEMSGIVEA RQTAMNFCKT KGFSEVLSGN VSLIVTELAT NLVKHAGSGE
LLIRSCTEGD VSGIECLALD RGMGITDIGG SLRGKYPATA GKETGLMAVR RLSSLFDLYS
IPEKGTAVLS RIETRSPEPV SDPPHPLCST RPEVGVVCLP LVPDEPCGDG WEVIRSENRT
VILVIDGLGH GPEASKVQVE AIRVFRKNPA GEPVEILRNL HAALRNTRGG VAAIAAIDEE
RGRVTYTGAG NISGRIITGH VTNKMVSLSG TVGDQIRQFS EFSYPWVTEA LLIMYSDGLT
MQWDLEDYPG LERKHPALIA GVLYRDHTRG TDDVTVLAVK LVGETS
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