Gene RoseRS_2296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2296 
Symbol 
ID5209263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2837333 
End bp2837908 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content60% 
IMG OID640595901 
Productstage II sporulation E family protein 
Protein accessionYP_001276625 
Protein GI148656420 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2208] Serine phosphatase RsbU, regulator of sigma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATCG CGTGGGGCGC CTGCAATCGC GCCAAGCAGG GGCAGTCGAT CTCCGGCGAC 
TCCTGGATGG TGACGCCGCT GAACGGCAAC GGCCTGCTGG CAGCAGTGAT CGACGGACTG
GGTGGCGGCG AGGAAGCCGC CCGTGCTGCG CGCGCAGCAG AGGCGATCTT TCGGGAACGC
GCGGAGCGAC CGCTCCAGGA ACTGATCCGG CTTTCGCACG AGGCGCTGCA CACCACCCGT
GGAGCAGTCG CCGGACTGCT CCGGCTCGAT CCGGTGCACA GCAGCGCCAC ATATGTAGGT
GTCGGTAACA TTGGAATCTA TGTCTACAGT CGCAAGCCTA TCAAACCGAT CTCGAAGAAT
GGCATCCTGG GATACCGGCT GCCGACATTG CTCGAACTGA CCTATACATA TGATCCCGGA
GATCTCTTCG TGCTGTACAG TGACGGGGTA TCATCACAAT TCACACAAGA CCTGCACCTG
GATATTCGCC AACCGCCGCA GACACTGGCG GAGCGGATTG TGCAAACCTA TGGCAAACAG
TCCGATGATG CCACTGTTGT CGTCGTTCAA ACCTAG
 
Protein sequence
MNIAWGACNR AKQGQSISGD SWMVTPLNGN GLLAAVIDGL GGGEEAARAA RAAEAIFRER 
AERPLQELIR LSHEALHTTR GAVAGLLRLD PVHSSATYVG VGNIGIYVYS RKPIKPISKN
GILGYRLPTL LELTYTYDPG DLFVLYSDGV SSQFTQDLHL DIRQPPQTLA ERIVQTYGKQ
SDDATVVVVQ T