Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2296 |
Symbol | |
ID | 5209263 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 2837333 |
End bp | 2837908 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640595901 |
Product | stage II sporulation E family protein |
Protein accession | YP_001276625 |
Protein GI | 148656420 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATATCG CGTGGGGCGC CTGCAATCGC GCCAAGCAGG GGCAGTCGAT CTCCGGCGAC TCCTGGATGG TGACGCCGCT GAACGGCAAC GGCCTGCTGG CAGCAGTGAT CGACGGACTG GGTGGCGGCG AGGAAGCCGC CCGTGCTGCG CGCGCAGCAG AGGCGATCTT TCGGGAACGC GCGGAGCGAC CGCTCCAGGA ACTGATCCGG CTTTCGCACG AGGCGCTGCA CACCACCCGT GGAGCAGTCG CCGGACTGCT CCGGCTCGAT CCGGTGCACA GCAGCGCCAC ATATGTAGGT GTCGGTAACA TTGGAATCTA TGTCTACAGT CGCAAGCCTA TCAAACCGAT CTCGAAGAAT GGCATCCTGG GATACCGGCT GCCGACATTG CTCGAACTGA CCTATACATA TGATCCCGGA GATCTCTTCG TGCTGTACAG TGACGGGGTA TCATCACAAT TCACACAAGA CCTGCACCTG GATATTCGCC AACCGCCGCA GACACTGGCG GAGCGGATTG TGCAAACCTA TGGCAAACAG TCCGATGATG CCACTGTTGT CGTCGTTCAA ACCTAG
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Protein sequence | MNIAWGACNR AKQGQSISGD SWMVTPLNGN GLLAAVIDGL GGGEEAARAA RAAEAIFRER AERPLQELIR LSHEALHTTR GAVAGLLRLD PVHSSATYVG VGNIGIYVYS RKPIKPISKN GILGYRLPTL LELTYTYDPG DLFVLYSDGV SSQFTQDLHL DIRQPPQTLA ERIVQTYGKQ SDDATVVVVQ T
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