| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5775 |
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| Symbol | |
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| ID | 6278840 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1979383 |
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| End bp | 1981047 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642616842 |
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| Product | histidine kinase |
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| Protein accession | YP_001889485 |
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| Protein GI | 187920453 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.941039 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCATC GCATTCTGTC CACGCCTATT AGTTCGAACC TGAGCCTGGT GGCCATTCGT
GACCGCTCGC GTCAGGTCGG CGAGTTGTTC GGGCTTGATA ATGTTCAGCG AACGCGCTTT
ATTACCGCTA TTTCGGAGAT CGCGCGCAAT GCTATCCGTT TTGCAGGCGG CGGGACGCTG
ACCTTTCTCG TCGGCGACGC TACCGACGCC GAAGGCCTGC AATGCGTGGT CGCGCAGATT
AGCGACAACG GTCCCGGCAT CGTCAACCTC GACGAACTGC TCAGGGAGTC GCGCGAACGC
GAAGCGGGCG TCGGGCTCGG TATTCCAGGT AGCCGGCGCA TGACGGATTG CTTTTTCATT
CACACGGAGC CGGGCAAGGG CACGACGGTG ACGCTGGAAA TGTTTCTTCC GCGCGCCACT
GTGCGGATGT CCGGCCGCGA GGTGAGCGCG CGCGCGGAGC AACTGACGCG GCGCAAGCCG
CAGACGCCGG TGGATGAACT CGAACAGCAG AATCGGGAAA TGATGCAGAC GCTCGAAGAG
CTTCGCCGGA AGAGTGTTGA ACTCGAAGAC GCCGATGCGC GAAAAAACGA GTTCCTTGCC
ATGCTCGCGC ACGAGTTGCG CAATCCGCTC GCGGCCATCT CGCTCTCGCT GCAGTTGGCG
CAGCAGAGCG GCAAAGAAGC GCATGAGAAA ACGTACGCGG TGATCGGACG GCAGACCGCG
CAATTGTCGC GAATGGTCAA CGATCTGCTG GACGTGTCGC GGATTACGCG CGGCAAGGTG
GAATTGCAAA CCGAGGTTGT GTCGATCTCC GCGCTGATCG ATGGTGGAAT CGAAATGTCA
TTGCCGGAAC TGAACCGGCG GGGCCACAAA GTCGCGGTTG AGCGTGCGTT GGAACCCATC
TTCGTCAGAG TGGACGCGGC GCGGCTCAAG CAGGTCTTCA ACAATATCAT TCACAACGCC
GCACGCTACA CGCTGCAACC CGACACGATC AAGATACTCG TGATGCGGGA AGGCAACGAA
GTACAGATTG CCATTACCGA TCGGGGCGTC GGCATCGATT CGAACTTGCT GCCGCGCGTG
TTCGATCTGT TTGCCCAGGC GCCGACTTCG ATTGGCCGGC AGGACGCCGG CCTGGGTATT
GGGCTAACCG TGGTGGAGCG GCTCGTGCGC GATCATGGCG GCTCTGTCGC CGCGTTCAGC
GAAGGTGCGG GAGCGGGGAC CCGGATCGTG GTGACGCTGC CCATAGTCGA TGAGCAGGCG
CCGGAGGGCG ATACGTCGTC GCAGCACGTG GTGCTGACCG CCGAGCACAA GGTGCTCGTC
GTGGACGACA ACAAGGATTC GGCCGACGCA CTGGCAGCGC TGCTCGAACT GCAGGGTTTC
GAATGCGCGG TCGCCTACGA CGGCGCCAGC GCACTCACGT TGACGGATAC GTTCGTCCCC
ACGGTCGGCG TGATCGATCT GGGGCTGCCG GACATGTCGG GGTTCGACGT TGCGGTTGCG
TTGCGCAAGA AGCACGGCGA CGCAGCGTTG ACGCTCGTCG CGCTGAGCGG TTATTCGAGC
GACGACTATC GTAGCGACGC CGTCGAAGCC GGCTTCAACG ATTACTTCGC CAAGCCGCTT
GTCATGGACG ACTTTCTGAA TTTCCTGACG ACGGTCGGCC CCTGA
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| Protein sequence | MRHRILSTPI SSNLSLVAIR DRSRQVGELF GLDNVQRTRF ITAISEIARN AIRFAGGGTL
TFLVGDATDA EGLQCVVAQI SDNGPGIVNL DELLRESRER EAGVGLGIPG SRRMTDCFFI
HTEPGKGTTV TLEMFLPRAT VRMSGREVSA RAEQLTRRKP QTPVDELEQQ NREMMQTLEE
LRRKSVELED ADARKNEFLA MLAHELRNPL AAISLSLQLA QQSGKEAHEK TYAVIGRQTA
QLSRMVNDLL DVSRITRGKV ELQTEVVSIS ALIDGGIEMS LPELNRRGHK VAVERALEPI
FVRVDAARLK QVFNNIIHNA ARYTLQPDTI KILVMREGNE VQIAITDRGV GIDSNLLPRV
FDLFAQAPTS IGRQDAGLGI GLTVVERLVR DHGGSVAAFS EGAGAGTRIV VTLPIVDEQA
PEGDTSSQHV VLTAEHKVLV VDDNKDSADA LAALLELQGF ECAVAYDGAS ALTLTDTFVP
TVGVIDLGLP DMSGFDVAVA LRKKHGDAAL TLVALSGYSS DDYRSDAVEA GFNDYFAKPL
VMDDFLNFLT TVGP
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