| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3169 |
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| Symbol | |
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| ID | 5540667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4112691 |
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| End bp | 4113269 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640895290 |
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| Product | protein serine/threonine phosphatase |
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| Protein accession | YP_001433241 |
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| Protein GI | 156743112 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.822146 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACCA TTACGTGGGG CGCCTGCAAT CGCGCCAAAC AGGGGCAATC GATCTCCGGC
GATGCCTGGA CGGTAGCAAT GCTGAACGGC AATGGCATAC TGGCGGCTGT TGTCGATGGG
TTGGGCGGCG GCGAAGAGGC GGCGCGCGCA GCGCGCCTGG CGGAAACCGT CTTCCGCGAA
CGCGCCGAAC GACCCCTCCA GGAACTTATC CGTGTCGCAC ACGAGGCGCT TCACACAACG
CGCGGCGCGG TCGCCGGATT GCTCCGGCTC GACCCGCTCC AGAGCAGCGC GTCGTATATT
GGCGTTGGCA ACATCGGCAT CTATGTCTAT AGCCGGAAAC CGATCAAGCC GATCTCGAAG
AATGGCATTC TTGGTTACCG CCTGCCAACA CTGCTCGAAC TAACGTATAC CTACGATCCA
GGCGATCTGT TCGTGTTGTA CAGTGACGGC GTTTCATCAC AATTCGCACA GGATTTGCAC
CTCGATATTC GCCAATCGCC GCAGGCTTTG GCAGAGCAGA TCGTCCACAC GTATGGCAAA
CATTCCGACG ATGCCACCGT CGTTGTCGTG CAGACCTGA
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| Protein sequence | MNTITWGACN RAKQGQSISG DAWTVAMLNG NGILAAVVDG LGGGEEAARA ARLAETVFRE
RAERPLQELI RVAHEALHTT RGAVAGLLRL DPLQSSASYI GVGNIGIYVY SRKPIKPISK
NGILGYRLPT LLELTYTYDP GDLFVLYSDG VSSQFAQDLH LDIRQSPQAL AEQIVHTYGK
HSDDATVVVV QT
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