| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1496 |
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| Symbol | |
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| ID | 5410416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 1551522 |
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| End bp | 1555283 |
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| Gene Length | 3762 bp |
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| Protein Length | 1253 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640868731 |
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| Product | signal transduction histidine kinase |
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| Protein accession | YP_001404657 |
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| Protein GI | 154151039 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase)
[COG3920] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.172842 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCT TGATCAGCCA CAGGGAAGTG CGGAATGAAC AGGACGTGGT CTCTGCCCGG
TTCCAGGCAC GCATTATCGC AGAACAACTC GGGTTTTCCA AGAGCGATCA GACCCGAATC
AGCACAGCTG TGTCCGAGAT TTCAAGAAAC ATGTTTCAGT ATGCCAACGG GGGTGAAATT
GAGTTCTGCA TCGATAATGG CAAGGTCCCC ACGGTCTTTT CTATCACGGC CCGGGATCAT
GGCAGGGGTA TTTCCCGGCT TGAGGAGATC CTCAATGGCC GGTTTACCCC GGGACAAGGG
AAAAGGCTGG GCATCATTGT TTCAAAACGT TTAATGGACC AGTTTTTCAT CGACACTCGT
AACGATGGTA CCACGGTTTT TCTGGGTAAG AATCTTCCAC TTACCGCCCC TCCGGTCACT
CCGGATCTCA TCTTGTGGAT CACTGACATG CTGGCAAAGA ATCTCACCCT CAACGGATTC
GATGAGATCC AGATCCGGAA TCAGGATATT ACTGATATTC TGGAAGAACT GCACCTGCGG
CAGGAAGATC TGGCCCAGGT CAACAGGGAG CTCGAAGAAA CCAACCGGGG CGTCGTAGCA
TTGTACGTGG AACTGGATGA CAAGGCCGCT GCATTAAAAA CATTACGTGA CGAGCTTGAG
ATCCGCGTAC AAGAACGGAC GAATGATCTT AGTAAGGCCA ATGATAACTT GGTAACTACC
CAGAAAGAAC TGCACGCACA GTTTGAAGAA CTTGCAGACC GGGACAGGGA GTTGTCGGTG
AGCGAGGAGC GGTTCCGTAT CAGTGCCCAG AGCATCAGCG ACGTGATCTG GGACCGGTCC
ATTCCCGATG GCAGGATGGA ATGGTATGGT CGGATCGATG AGCTGCTCGG GTATGCCCCT
CTTGAGTTTC CCCGGACTTT CGATTCGTGG AAGAAGAGTA TCTATCCTGA TGACCGGGAC
AGGGTCATGG CACTCTTAGA TCGCCATGTA AAGACCCGGG CTCCTTATGC AACGGAGTAC
CGGGTTGTAC AAAAAGACGG GAAGATCCGG TATTGGACTG ACCGGGGAAT TGCCATGCTG
GACAGTCAGG GCAATGCGTA CAGGATGGTG GGTTCCTGCA CTGATATCAC GGATCGCAGG
CTTGCAGACG AGGAGCGGGC CCGTCTCGCC GCCATTGTGG AGTACTCTGA AGATGCAATC
ATTAGCAAAA CACTTGACGG GATCGTCACA TCTTGGAACG CCGGAGCCGA GCGGATCTAC
GGGTATTCTG TACAGGAGAT GGTTGGCAAG GAAATTTCGC TGCTGGAGTC GCCGGATCAC
CCAAACGACA CCGTATTGAT TCTTGAACGG ATCAGGAACG GTGAACCGGT CATCCGCTAC
GAAACCCGGC GCAGGAGGAA AGACGGCGAG CTGATCGATA TCACCCTTAC TGCATCTCAG
ATCAGGGATG CACAAAATCG TCTGATCGGT GTGTCCACCA TTGCCCATGA TATCACCCAG
CGCAAACGGG CAGAAGATGC AATGCATGCT TCCGAGATGC GGTACCGGCG GCTTTTTGAA
GCGGCGCAGG ATGGCATCCT CATCCTTGAT GCAGAGTCCG GCCAGATCGT CGAGGTAAAT
CCCTTTTTAA TCAACATGCT GGGTTTCTCG CGCGAACAGT TCTTGGGTAA GAAAATCTGG
GAGATCGGGA CGTTCAAGGA TATCGTTGCC AACAAAGACA ATTTCGGAGA ACTGCAGCGG
AAAGAATATA TCCGGTATGA GGATATGCCC CTTGAAACCT CCGATGGGCA AAGGATCGCC
GTGGAGTTTG TCAGTAACGT CTACGAGGTG AACAACAAGA AGGTCATCCA GTGCAATATC
AGGGATAATA CCGACCGCAA GCTCGCAGAA GAAGCAAAAA TTGCTTCCGA GATGCGGTAC
CGGCGGCTTT TTGAGGCGGC GCAGGATGGC ATCCTCATCC TCGATGCAGA GTCCGGCCAG
ATCGTTGAGG TAAATCCCTT TTTAATCAAC ATGCTAGGTT TCTCGCGCGA ACAGTTCCTG
GGTAAGAAAA TCTGGGAGAT CGGGACGTTC AAGGATATCG TTGCAAACAA AGACAATTTC
GGAGAACTGC AGCGGAAAGA ATATATCCGG TATGAGGATA TGCCCCTTGA AACTGCCGAC
GGGCGGCATA TAGCAGTGGA GTTTATCAGT AACGTCTATG AGGTGAACAA CAAGAAGGTC
ATCCAGTGCA ATATCCGGGA TAGTACCGAC CGCAAGCTCG CAGAAGAAGC AAAAATTGCT
TCCGAGGTCC GGTACCGACG TCTTTTTGAG ACTGCACAGG ATGGCATTCT CATCCTCGAT
GCAGAGTCCG GCCAGATCGT TGAGGTAAAT CCCTTTTTAA TCAACATGCT GGGTTTCTCG
CGCGAACAGT TCCTGGGTAA GAAAATCTGG GAGATCGGGA CGTTCAAGGA TATCGTTGCC
AACAAAGACA ATTTCGAAGA ACTGCAGCGG AAAGAATATA TCAGTTACGA AGACATGCCC
CTCGAAACTG CCGATGGGCA AAGAATTGCC GTGGAGTTCA TCAGTAACGT CTACGAGGTG
AACAACAAGA AGGTCATCCA GTGCAATATC CGGGATATTA CCAAGCGCAA GCTCGCAGAA
GAGGCACTGC GCCAAAAAAA TGAGGAAATT GACGGGTACT TTACCAATAC CCTCGATCTG
CTCTGCATCG CAGACGCGGA CGGGCATTTC CGACGCCCGA ATAAGGAGTG GGAAACGGCT
CTCGGGTACA GTCCTGCCGA GCTGGAGGGG AAACGGCTCT TTGATTTTGT CCACCCTGAC
GATATGGAGG TGTTTCTTGG TGCAATGTCC GAACTGAGTG CAGGTAAAAA AGTCCTCCAA
TTCACGAACC GGTATCGCCA CAGGAACCAG ACGTACCGCT GGATAGAATG GCGGTTGTTC
TCTGCAGGAA ACCTCATCTA TGCATCGGCA CGAGATGTTA CGGAAAGGAA GAAGATGACC
GATCTGGTCG AAGCGTCGCT AGCCGAGAAA GAGACCCTGC TTCGGGAGAT CCACCACCGG
GTCAAGAACA ACCTCCAGAT CATTTCGAGC CTCCTTAACC TGCAGATCCG TAAGATAGAC
GATCCCAAAA CCATTGAAGT CTTAAAAGAC TGCCAGTCCC GGGTGCTCTC TATGGCACTT
GTCCACGAAC ACCTCTACAA GGGCAAAGAT TTCTCGCGTA TCGACCTGAA AAATTATATC
CATTCACTGG GAATGCAGCT CTCGCAGTCG TACGGAAACG CAAACGAAAT TGTCCGGTTC
GACCTGAATC TCCCTGATAT TTACGTAGAT ATCAATACCG CAATTCCCCT GGGCCTCATC
ATAAACGAAC TGATCACGAA CAGTTTAAAG TATGCATTTA AAGGCAGGAA AGACGGGAAA
CTCTCTATCA CGGCTACTGA GAATGATCGC GCCCTTACGC TTATTGTTGC AGATAATGGT
GTCGGAATGC CTGAAGGCAT CACGCTGGAG AACCAGACGT CACTGGGACT CCGGCTTGTC
AAAACACTCA CCGGCCAGAT CCACGGTACG GTTGTGATCG ATCGGACCGG GGGTACAAAG
TTTGTGTTTG TAATTCCCAA ACCCGCAGAA ATCCAAAGAA CTGGACCGCC GGTAAACACG
CTCACCCGCC AGATCCACAG CACCGAGACA ATTGACCATC CGGATGAGGC GAAGTTTGTC
CTCACGGTCC CCAAACCGGC AGAAACCACG GGCAGGATGT GA
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| Protein sequence | MSTLISHREV RNEQDVVSAR FQARIIAEQL GFSKSDQTRI STAVSEISRN MFQYANGGEI
EFCIDNGKVP TVFSITARDH GRGISRLEEI LNGRFTPGQG KRLGIIVSKR LMDQFFIDTR
NDGTTVFLGK NLPLTAPPVT PDLILWITDM LAKNLTLNGF DEIQIRNQDI TDILEELHLR
QEDLAQVNRE LEETNRGVVA LYVELDDKAA ALKTLRDELE IRVQERTNDL SKANDNLVTT
QKELHAQFEE LADRDRELSV SEERFRISAQ SISDVIWDRS IPDGRMEWYG RIDELLGYAP
LEFPRTFDSW KKSIYPDDRD RVMALLDRHV KTRAPYATEY RVVQKDGKIR YWTDRGIAML
DSQGNAYRMV GSCTDITDRR LADEERARLA AIVEYSEDAI ISKTLDGIVT SWNAGAERIY
GYSVQEMVGK EISLLESPDH PNDTVLILER IRNGEPVIRY ETRRRRKDGE LIDITLTASQ
IRDAQNRLIG VSTIAHDITQ RKRAEDAMHA SEMRYRRLFE AAQDGILILD AESGQIVEVN
PFLINMLGFS REQFLGKKIW EIGTFKDIVA NKDNFGELQR KEYIRYEDMP LETSDGQRIA
VEFVSNVYEV NNKKVIQCNI RDNTDRKLAE EAKIASEMRY RRLFEAAQDG ILILDAESGQ
IVEVNPFLIN MLGFSREQFL GKKIWEIGTF KDIVANKDNF GELQRKEYIR YEDMPLETAD
GRHIAVEFIS NVYEVNNKKV IQCNIRDSTD RKLAEEAKIA SEVRYRRLFE TAQDGILILD
AESGQIVEVN PFLINMLGFS REQFLGKKIW EIGTFKDIVA NKDNFEELQR KEYISYEDMP
LETADGQRIA VEFISNVYEV NNKKVIQCNI RDITKRKLAE EALRQKNEEI DGYFTNTLDL
LCIADADGHF RRPNKEWETA LGYSPAELEG KRLFDFVHPD DMEVFLGAMS ELSAGKKVLQ
FTNRYRHRNQ TYRWIEWRLF SAGNLIYASA RDVTERKKMT DLVEASLAEK ETLLREIHHR
VKNNLQIISS LLNLQIRKID DPKTIEVLKD CQSRVLSMAL VHEHLYKGKD FSRIDLKNYI
HSLGMQLSQS YGNANEIVRF DLNLPDIYVD INTAIPLGLI INELITNSLK YAFKGRKDGK
LSITATENDR ALTLIVADNG VGMPEGITLE NQTSLGLRLV KTLTGQIHGT VVIDRTGGTK
FVFVIPKPAE IQRTGPPVNT LTRQIHSTET IDHPDEAKFV LTVPKPAETT GRM
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