22 homologs were found in PanDaTox collection
for query gene Vapar_5997 on replicon NC_012792
Organism: Variovorax paradoxus S110



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012792  Vapar_5997  response regulator receiver protein  100 
 
 		 103 aa  207  5e-53  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_012792  Vapar_5989  response regulator receiver protein  97.59 
 
 		 83 aa  167  6e-41  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
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NC_008752  Aave_3861  response regulator receiver protein  40.82 
 
 		 131 aa  68.6  0.00000000003  Acidovorax citrulli AAC00-1  Bacteria  normal  1  normal  0.766529 
 
 
-
 
NC_008781  Pnap_0923  response regulator receiver protein  43.33 
 
 		 132 aa  68.6  0.00000000003  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  1 
 
 
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NC_012791  Vapar_2734  response regulator receiver protein  38.78 
 
 		 130 aa  68.6  0.00000000003  Variovorax paradoxus S110  Bacteria  normal  0.434991  n/a   
 
 
-
 
NC_012791  Vapar_4107  response regulator receiver protein  41.94 
 
 		 137 aa  68.2  0.00000000004  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
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NC_010002  Daci_1810  response regulator receiver protein  40.66 
 
 		 142 aa  68.2  0.00000000004  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008825  Mpe_A2901  putative transcription regulator protein  40.22 
 
 		 132 aa  64.7  0.0000000004  Methylibium petroleiphilum PM1  Bacteria  normal  0.0194664  normal  1 
 
 
-
 
NC_007948  Bpro_0882  response regulator receiver domain-containing protein  40.45 
 
 		 131 aa  64.3  0.0000000006  Polaromonas sp. JS666  Bacteria  normal  0.489217  normal  0.567354 
 
 
-
 
NC_008782  Ajs_3508  response regulator receiver protein  38.14 
 
 		 136 aa  63.9  0.0000000008  Acidovorax sp. JS42  Bacteria  normal  0.790659  normal  1 
 
 
-
 
NC_011992  Dtpsy_2831  response regulator receiver protein  38.14 
 
 		 136 aa  63.5  0.0000000009  Acidovorax ebreus TPSY  Bacteria  normal  1  n/a   
 
 
-
 
NC_008781  Pnap_3994  response regulator receiver protein  37.89 
 
 		 146 aa  63.2  0.000000001  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.73116  normal  0.876977 
 
 
-
 
NC_008786  Veis_0033  response regulator receiver protein  37.5 
 
 		 153 aa  63.2  0.000000001  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.315681  normal  1 
 
 
-
 
NC_007948  Bpro_2455  response regulator receiver domain-containing protein  37.23 
 
 		 156 aa  62.8  0.000000002  Polaromonas sp. JS666  Bacteria  normal  0.275006  normal  0.0886076 
 
 
-
 
NC_012791  Vapar_3636  response regulator receiver protein  37 
 
 		 126 aa  62  0.000000002  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_012792  Vapar_6326  response regulator receiver protein  39.19 
 
 		 123 aa  58.9  0.00000002  Variovorax paradoxus S110  Bacteria  normal  0.212906  n/a   
 
 
-
 
NC_007948  Bpro_0607  response regulator receiver domain-containing protein  39.13 
 
 		 129 aa  58.9  0.00000002  Polaromonas sp. JS666  Bacteria  hitchhiker  0.00000161034  normal  1 
 
 
-
 
NC_012791  Vapar_1259  response regulator receiver protein  36.56 
 
 		 136 aa  58.5  0.00000003  Variovorax paradoxus S110  Bacteria  normal  0.499071  n/a   
 
 
-
 
NC_007908  Rfer_1872  response regulator receiver domain-containing protein  38.3 
 
 		 139 aa  57.8  0.00000005  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_007404  Tbd_2236  response regulator receiver domain-containing protein  38.54 
 
 		 155 aa  52.4  0.000002  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007948  Bpro_4742  response regulator receiver domain-containing protein  34.78 
 
 		 133 aa  49.7  0.00001  Polaromonas sp. JS666  Bacteria  normal  0.881112  normal  1 
 
 
-
 
NC_008781  Pnap_0398  response regulator receiver protein  32.61 
 
 		 132 aa  44.7  0.0005  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  0.151817 
 
 
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