21 homologs were found in PanDaTox collection
for query gene Vapar_5989 on replicon NC_012792
Organism: Variovorax paradoxus S110



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012792  Vapar_5989  response regulator receiver protein  100 
 
 		 83 aa  169  1e-41  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_012792  Vapar_5997  response regulator receiver protein  97.59 
 
 		 103 aa  167  6e-41  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_008781  Pnap_0923  response regulator receiver protein  41.98 
 
 		 132 aa  63.2  0.000000001  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010002  Daci_1810  response regulator receiver protein  42.11 
 
 		 142 aa  62.4  0.000000002  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008786  Veis_0033  response regulator receiver protein  43.66 
 
 		 153 aa  59.7  0.00000001  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.315681  normal  1 
 
 
-
 
NC_012791  Vapar_4107  response regulator receiver protein  40.51 
 
 		 137 aa  59.3  0.00000002  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_008752  Aave_3861  response regulator receiver protein  40.74 
 
 		 131 aa  59.3  0.00000002  Acidovorax citrulli AAC00-1  Bacteria  normal  1  normal  0.766529 
 
 
-
 
NC_012792  Vapar_6326  response regulator receiver protein  39.19 
 
 		 123 aa  58.5  0.00000003  Variovorax paradoxus S110  Bacteria  normal  0.212906  n/a   
 
 
-
 
NC_012791  Vapar_2734  response regulator receiver protein  38.55 
 
 		 130 aa  58.5  0.00000003  Variovorax paradoxus S110  Bacteria  normal  0.434991  n/a   
 
 
-
 
NC_008781  Pnap_3994  response regulator receiver protein  40.74 
 
 		 146 aa  58.5  0.00000003  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.73116  normal  0.876977 
 
 
-
 
NC_008825  Mpe_A2901  putative transcription regulator protein  38.27 
 
 		 132 aa  57.8  0.00000004  Methylibium petroleiphilum PM1  Bacteria  normal  0.0194664  normal  1 
 
 
-
 
NC_007948  Bpro_0882  response regulator receiver domain-containing protein  39.47 
 
 		 131 aa  56.2  0.0000001  Polaromonas sp. JS666  Bacteria  normal  0.489217  normal  0.567354 
 
 
-
 
NC_008782  Ajs_3508  response regulator receiver protein  38.75 
 
 		 136 aa  55.1  0.0000003  Acidovorax sp. JS42  Bacteria  normal  0.790659  normal  1 
 
 
-
 
NC_011992  Dtpsy_2831  response regulator receiver protein  38.75 
 
 		 136 aa  55.1  0.0000003  Acidovorax ebreus TPSY  Bacteria  normal  1  n/a   
 
 
-
 
NC_007948  Bpro_2455  response regulator receiver domain-containing protein  36.25 
 
 		 156 aa  55.5  0.0000003  Polaromonas sp. JS666  Bacteria  normal  0.275006  normal  0.0886076 
 
 
-
 
NC_007948  Bpro_0607  response regulator receiver domain-containing protein  38.96 
 
 		 129 aa  52.8  0.000002  Polaromonas sp. JS666  Bacteria  hitchhiker  0.00000161034  normal  1 
 
 
-
 
NC_012791  Vapar_1259  response regulator receiver protein  38.16 
 
 		 136 aa  51.6  0.000003  Variovorax paradoxus S110  Bacteria  normal  0.499071  n/a   
 
 
-
 
NC_007908  Rfer_1872  response regulator receiver domain-containing protein  41.43 
 
 		 139 aa  51.6  0.000004  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_012791  Vapar_3636  response regulator receiver protein  34.21 
 
 		 126 aa  50.8  0.000005  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_007404  Tbd_2236  response regulator receiver domain-containing protein  37.18 
 
 		 155 aa  47  0.00008  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007948  Bpro_4742  response regulator receiver domain-containing protein  35 
 
 		 133 aa  45.8  0.0002  Polaromonas sp. JS666  Bacteria  normal  0.881112  normal  1 
 
 
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