| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2455 |
|---|
| Symbol | |
|---|
| ID | 4014877 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 2560711 |
|---|
| End bp | 2561181 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637942120 |
|---|
| Product | response regulator receiver domain-containing protein |
|---|
| Protein accession | YP_549272 |
|---|
| Protein GI | 91788320 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.275006 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0886076 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGCTAATT TCCTTCCGGG CGCCCGCTTA ACAATGAAGA TGAAAACCTA CCTGGTCGAA
GACAACCCGA CCATTCGAGA AAACCTGATA AGCACGCTGG AAGAACTCGC GCCGATTGAG
GCCGTCGGTA CAGCCGATAC TGAAGAGGAA GGCGCTGCCT GGCTCACCGG TAACAATGCC
CAATGGGACC TGGCCATCGT CGACGTGTTT CTCAAAAGTG GCAGCGGACT GGGTGTGCTT
GAAGCTTGCC GCACCCGTGG AACGCTCCAG AAATTAGTGG TTTTCAGCAA TTACACGAGC
CGCGAAATGC GCCTGCGGTG CATCCAGCTC GGCGTGGACG CCGTCTTTGA CAAGTCAACG
GAGATCGACG CCTTGCTGGA TTACTGTGTA GCCCAAAGCG AGAATCTGGA CGCGGCCTCG
AGCAGTCGCT GCCAGAGCTA TCAGAATGGA TCCAACCTCC AGAGGGCCTG A
|
|---|
| Protein sequence | MANFLPGARL TMKMKTYLVE DNPTIRENLI STLEELAPIE AVGTADTEEE GAAWLTGNNA
QWDLAIVDVF LKSGSGLGVL EACRTRGTLQ KLVVFSNYTS REMRLRCIQL GVDAVFDKST
EIDALLDYCV AQSENLDAAS SSRCQSYQNG SNLQRA
|
|---|
| |