Gene Vapar_1259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_1259 
Symbol 
ID7973183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp1372865 
End bp1373275 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content68% 
IMG OID644791856 
Productresponse regulator receiver protein 
Protein accessionYP_002943176 
Protein GI239814266 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.499071 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACACCG TCAGAACCTT CATCGTCGAG GACAACCCCG CCATCCGCGA GAACCTGGCC 
GGCACGCTGC GCGAGGTGGC GCGGGTCGAT CCGGTGGGCC AGGCCGAAAC CGAGAACGAG
GGCGCGCGCT GGCTCGCGGG CAACCTGTCG CAATGGGACC TGGCCATCGT CGACCTGTTC
CTCAAGGACG GCACCGGCTT CGGCGTGCTC GAGGCCTGCC GCAACCGCGA TCCGAACCAG
AAGATGGTGG TGCTCAGCAA CCACCTGACG CCGCAGATGC GGCGCAAGTG CGCGCAGCTG
GGCGCCGACG CGGTGTTCGA CAAGGCCACC GAGCTCGACG ACCTGGTCGA TTTCTGCCTG
CGCCGGCGCA TGGAGCAGTT CGCGGCCCCG CCATTTCCTG CGGCGCACTG A
 
Protein sequence
MDTVRTFIVE DNPAIRENLA GTLREVARVD PVGQAETENE GARWLAGNLS QWDLAIVDLF 
LKDGTGFGVL EACRNRDPNQ KMVVLSNHLT PQMRRKCAQL GADAVFDKAT ELDDLVDFCL
RRRMEQFAAP PFPAAH