Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1259 |
Symbol | |
ID | 7973183 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 1372865 |
End bp | 1373275 |
Gene Length | 411 bp |
Protein Length | 136 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644791856 |
Product | response regulator receiver protein |
Protein accession | YP_002943176 |
Protein GI | 239814266 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.499071 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACACCG TCAGAACCTT CATCGTCGAG GACAACCCCG CCATCCGCGA GAACCTGGCC GGCACGCTGC GCGAGGTGGC GCGGGTCGAT CCGGTGGGCC AGGCCGAAAC CGAGAACGAG GGCGCGCGCT GGCTCGCGGG CAACCTGTCG CAATGGGACC TGGCCATCGT CGACCTGTTC CTCAAGGACG GCACCGGCTT CGGCGTGCTC GAGGCCTGCC GCAACCGCGA TCCGAACCAG AAGATGGTGG TGCTCAGCAA CCACCTGACG CCGCAGATGC GGCGCAAGTG CGCGCAGCTG GGCGCCGACG CGGTGTTCGA CAAGGCCACC GAGCTCGACG ACCTGGTCGA TTTCTGCCTG CGCCGGCGCA TGGAGCAGTT CGCGGCCCCG CCATTTCCTG CGGCGCACTG A
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Protein sequence | MDTVRTFIVE DNPAIRENLA GTLREVARVD PVGQAETENE GARWLAGNLS QWDLAIVDLF LKDGTGFGVL EACRNRDPNQ KMVVLSNHLT PQMRRKCAQL GADAVFDKAT ELDDLVDFCL RRRMEQFAAP PFPAAH
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