| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0398 |
|---|
| Symbol | |
|---|
| ID | 4686984 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 396843 |
|---|
| End bp | 397241 |
|---|
| Gene Length | 399 bp |
|---|
| Protein Length | 132 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639833391 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_980642 |
|---|
| Protein GI | 121603313 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.151817 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTTAA AAGTTTTTCT GGTTGAAGAC AGCGCGGCCC AGCGTGCTTA CTTGGCGCAG
GCCTTGAGGG CCGAAGCCAA GGTGGAGATT GTGGGTATTG CGGAAACAGA ACACCAGGCA
ATTCACTGGC TTGACAACAA CGCCGACCAG TGGGACATCG CCCTGGTCGA TCTTTTCTTG
GGAGAAGGCT CGGGCGCCGG CGTGATCCAG CACTGCCATG ATCGCCGTCC CGACCAGAGC
GTTTTTGTCA TGACCAACCA TTCCCAAAAC GAGGCCTTGC TGCATCACTG CAAGCTGCTG
GGTGCCGATG CGGTGTATCA CAAGGCGACA GAACTGGAGA ACCTGCTGGC TTTATTGCAG
GAAAGTGCTC ACTCAAACAG CCGATGCGTT GCCCAGTAA
|
|---|
| Protein sequence | MALKVFLVED SAAQRAYLAQ ALRAEAKVEI VGIAETEHQA IHWLDNNADQ WDIALVDLFL
GEGSGAGVIQ HCHDRRPDQS VFVMTNHSQN EALLHHCKLL GADAVYHKAT ELENLLALLQ
ESAHSNSRCV AQ
|
|---|
| |