More than 300 homologs were found in PanDaTox collection
for query gene Vapar_0443 on replicon NC_012791
Organism: Variovorax paradoxus S110



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012791  Vapar_0443  acyl-CoA dehydrogenase domain protein  100 
 
 
385 aa  798    Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2752  acyl-CoA dehydrogenase-like  81.25 
 
 
387 aa  661    Rhodoferax ferrireducens T118  Bacteria  normal  0.171242  n/a   
 
 
-
 
NC_007948  Bpro_3014  acyl-CoA dehydrogenase-like  81.51 
 
 
389 aa  664    Polaromonas sp. JS666  Bacteria  normal  0.51583  normal  0.368309 
 
 
-
 
NC_008786  Veis_4102  acyl-CoA dehydrogenase domain-containing protein  77.66 
 
 
388 aa  610  1e-173  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.757866  normal  0.974192 
 
 
-
 
NC_010678  Rpic_4927  acyl-CoA dehydrogenase domain protein  65.8 
 
 
380 aa  541  1e-153  Ralstonia pickettii 12J  Bacteria  normal  normal  0.905693 
 
 
-
 
NC_009439  Pmen_0898  acyl-CoA dehydrogenase domain-containing protein  65.97 
 
 
379 aa  544  1e-153  Pseudomonas mendocina ymp  Bacteria  normal  0.592416  normal 
 
 
-
 
NC_012857  Rpic12D_3850  acyl-CoA dehydrogenase domain protein  65.8 
 
 
380 aa  541  1e-153  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4696  Acyl-CoA dehydrogenase-like  65.71 
 
 
378 aa  535  1e-151  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.0700778  normal  0.0611001 
 
 
-
 
NC_009656  PSPA7_5007  acyl-CoA dehydrogenase  65.45 
 
 
378 aa  533  1e-150  Pseudomonas aeruginosa PA7  Bacteria  normal  0.284133  n/a   
 
 
-
 
NC_008836  BMA10229_A1825  acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  65.97 
 
 
378 aa  522  1e-147  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3482  long-chain specific acyl-CoA dehydrogenase  65.97 
 
 
378 aa  522  1e-147  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_0069  acyl-CoA dehydrogenase  65.97 
 
 
378 aa  522  1e-147  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2728  long-chain specific acyl-CoA dehydrogenase  65.97 
 
 
378 aa  522  1e-147  Burkholderia mallei NCTC 10247  Bacteria  normal  0.890874  n/a   
 
 
-
 
NC_009074  BURPS668_0071  acyl-CoA dehydrogenase  65.97 
 
 
378 aa  521  1e-147  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I0060  acyl-CoA dehydrogenase  65.97 
 
 
378 aa  523  1e-147  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0285  putative acyl-CoA dehydrogenase  65.97 
 
 
430 aa  520  1e-146  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2399  acyl-CoA dehydrogenase domain-containing protein  65.62 
 
 
379 aa  500  1e-140  Marinobacter aquaeolei VT8  Bacteria  normal  0.470639  n/a   
 
 
-
 
NC_009767  Rcas_2461  acyl-CoA dehydrogenase domain-containing protein  59.38 
 
 
381 aa  451  1.0000000000000001e-126  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.160964  normal 
 
 
-
 
NC_009523  RoseRS_2850  acyl-CoA dehydrogenase domain-containing protein  58.59 
 
 
381 aa  450  1e-125  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_2439  long-chain-acyl-CoA dehydrogenase  56.66 
 
 
391 aa  445  1.0000000000000001e-124  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0991983  normal  0.0569635 
 
 
-
 
NC_009565  TBFG_12737  acyl-CoA dehydrogenase fadE20  55.35 
 
 
386 aa  444  1e-123  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.416268 
 
 
-
 
NC_013595  Sros_1015  acyl-CoA dehydrogenase domain-containing protein  53.39 
 
 
381 aa  439  9.999999999999999e-123  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.629454 
 
 
-
 
NC_013757  Gobs_3923  acyl-CoA dehydrogenase domain protein  56.1 
 
 
381 aa  439  9.999999999999999e-123  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B3552  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  54.59 
 
 
396 aa  431  1e-120  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0526  acyl-CoA dehydrogenase domain-containing protein  54.69 
 
 
381 aa  432  1e-120  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0149792 
 
 
-
 
NC_008699  Noca_3613  acyl-CoA dehydrogenase domain-containing protein  53.02 
 
 
382 aa  426  1e-118  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4164  acyl-CoA dehydrogenase domain protein  54.17 
 
 
380 aa  422  1e-117  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_5666  acyl-CoA dehydrogenase domain protein  57.03 
 
 
381 aa  421  1e-117  Actinosynnema mirum DSM 43827  Bacteria  normal  0.764925  n/a   
 
 
-
 
NC_008740  Maqu_2118  acyl-CoA dehydrogenase domain-containing protein  54.99 
 
 
382 aa  424  1e-117  Marinobacter aquaeolei VT8  Bacteria  normal  0.0463825  n/a   
 
 
-
 
NC_013947  Snas_3899  acyl-CoA dehydrogenase domain-containing protein  52.6 
 
 
380 aa  423  1e-117  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.601021  normal 
 
 
-
 
NC_010002  Daci_0697  acyl-CoA dehydrogenase domain-containing protein  53.66 
 
 
380 aa  421  1e-116  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_012792  Vapar_5772  acyl-CoA dehydrogenase domain protein  55 
 
 
388 aa  418  1e-116  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0103  acyl-CoA dehydrogenase domain-containing protein  52.47 
 
 
384 aa  420  1e-116  Acidovorax sp. JS42  Bacteria  normal  normal  0.250582 
 
 
-
 
NC_008347  Mmar10_0539  acyl-CoA dehydrogenase domain-containing protein  55.35 
 
 
388 aa  420  1e-116  Maricaulis maris MCS10  Bacteria  normal  0.191308  normal  0.162597 
 
 
-
 
NC_013510  Tcur_1158  acyl-CoA dehydrogenase domain protein  52.63 
 
 
380 aa  417  9.999999999999999e-116  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_0130  acyl-CoA dehydrogenase domain-containing protein  54.4 
 
 
387 aa  416  9.999999999999999e-116  Caulobacter sp. K31  Bacteria  normal  0.654593  normal 
 
 
-
 
NC_010002  Daci_4827  acyl-CoA dehydrogenase domain-containing protein  54.19 
 
 
382 aa  412  1e-114  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B4753  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  52.09 
 
 
382 aa  414  1e-114  Ralstonia eutropha JMP134  Bacteria  normal  0.231172  n/a   
 
 
-
 
NC_007974  Rmet_5152  putative acyl-CoA dehydrogenase  51.72 
 
 
381 aa  414  1e-114  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.276621 
 
 
-
 
NC_009077  Mjls_3197  acyl-CoA dehydrogenase domain-containing protein  53.12 
 
 
381 aa  408  1e-113  Mycobacterium sp. JLS  Bacteria  normal  0.107231  normal 
 
 
-
 
NC_008726  Mvan_0906  acyl-CoA dehydrogenase domain-containing protein  50.52 
 
 
380 aa  409  1e-113  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_3185  acyl-CoA dehydrogenase-like protein  53.12 
 
 
381 aa  408  1e-113  Mycobacterium sp. MCS  Bacteria  normal  0.470854  n/a   
 
 
-
 
NC_008705  Mkms_3247  acyl-CoA dehydrogenase domain-containing protein  53.12 
 
 
381 aa  408  1e-113  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_0666  acyl-CoA dehydrogenase  53.02 
 
 
386 aa  407  1.0000000000000001e-112  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2971  acyl-CoA dehydrogenase domain-containing protein  53.12 
 
 
379 aa  405  1.0000000000000001e-112  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.134618 
 
 
-
 
NC_008463  PA14_49080  putative acyl-CoA dehydrogenase  53.39 
 
 
379 aa  405  1.0000000000000001e-112  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.0000217438 
 
 
-
 
NC_010338  Caul_1892  acyl-CoA dehydrogenase domain-containing protein  50.52 
 
 
378 aa  404  1e-111  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_1836  acyl-CoA dehydrogenase domain-containing protein  51.97 
 
 
385 aa  404  1e-111  Sphingomonas wittichii RW1  Bacteria  normal  0.306245  normal 
 
 
-
 
NC_009952  Dshi_0838  acyl-CoA dehydrogenase domain protein  51.43 
 
 
382 aa  400  9.999999999999999e-111  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.541206 
 
 
-
 
NC_007908  Rfer_0994  acyl-CoA dehydrogenase-like  51.32 
 
 
382 aa  399  9.999999999999999e-111  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_4587  acyl-CoA dehydrogenase domain-containing protein  48.44 
 
 
380 aa  398  9.999999999999999e-111  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_4601  acyl-CoA dehydrogenase domain-containing protein  53.59 
 
 
381 aa  400  9.999999999999999e-111  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_24700  acyl-CoA dehydrogenase  54.08 
 
 
373 aa  398  9.999999999999999e-111  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.791758  normal 
 
 
-
 
NC_008705  Mkms_4154  acyl-CoA dehydrogenase domain-containing protein  48.18 
 
 
380 aa  397  1e-109  Mycobacterium sp. KMS  Bacteria  normal  normal  0.815208 
 
 
-
 
NC_007333  Tfu_1512  putative acyl-CoA dehydrogenase  53.63 
 
 
382 aa  398  1e-109  Thermobifida fusca YX  Bacteria  normal  0.116644  n/a   
 
 
-
 
NC_007348  Reut_B4166  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  50.39 
 
 
379 aa  396  1e-109  Ralstonia eutropha JMP134  Bacteria  normal  0.503131  n/a   
 
 
-
 
NC_009077  Mjls_4308  acyl-CoA dehydrogenase domain-containing protein  48.18 
 
 
380 aa  397  1e-109  Mycobacterium sp. JLS  Bacteria  normal  0.828452  normal 
 
 
-
 
NC_007974  Rmet_5024  putative acyl-CoA dehydrogenase  49.34 
 
 
379 aa  395  1e-109  Cupriavidus metallidurans CH34  Bacteria  hitchhiker  0.00000851023  normal  0.285012 
 
 
-
 
NC_008146  Mmcs_4078  acyl-CoA dehydrogenase-like protein  48.18 
 
 
380 aa  397  1e-109  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_4192  putative acyl-CoA dehydrogenase  52.6 
 
 
379 aa  397  1e-109  Pseudomonas aeruginosa PA7  Bacteria  normal  0.33798  n/a   
 
 
-
 
NC_013441  Gbro_2001  acyl-CoA dehydrogenase domain protein  53.66 
 
 
366 aa  396  1e-109  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_007509  Bcep18194_C7184  Acyl-CoA dehydrogenase  52.8 
 
 
384 aa  393  1e-108  Burkholderia sp. 383  Bacteria  normal  normal  0.0110483 
 
 
-
 
NC_009338  Mflv_2118  acyl-CoA dehydrogenase domain-containing protein  47.92 
 
 
380 aa  394  1e-108  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.438957 
 
 
-
 
NC_011992  Dtpsy_0120  acyl-CoA dehydrogenase domain protein  49.87 
 
 
384 aa  394  1e-108  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_0463  acyl-CoA dehydrogenase domain-containing protein  51.46 
 
 
385 aa  389  1e-107  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.547783  normal 
 
 
-
 
NC_007953  Bxe_C0602  putative acyl-CoA dehydrogenase  50.13 
 
 
374 aa  389  1e-107  Burkholderia xenovorans LB400  Bacteria  normal  0.0892135  normal  0.143827 
 
 
-
 
NC_011004  Rpal_1187  acyl-CoA dehydrogenase domain protein  52.28 
 
 
381 aa  385  1e-106  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_4074  Acyl-CoA dehydrogenase-like  52.28 
 
 
381 aa  387  1e-106  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.23521 
 
 
-
 
NC_007952  Bxe_B2724  putative acyl-CoA dehydrogenase  47.77 
 
 
379 aa  387  1e-106  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_1559  acyl-CoA dehydrogenase-like  51.73 
 
 
387 aa  387  1e-106  Ruegeria sp. TM1040  Bacteria  normal  normal  0.456319 
 
 
-
 
NC_008048  Sala_3159  acyl-CoA dehydrogenase-like protein  50.39 
 
 
384 aa  388  1e-106  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_4117  acyl-CoA dehydrogenase domain protein  51.6 
 
 
386 aa  387  1e-106  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_1598  acyl-CoA dehydrogenase domain protein  50.65 
 
 
381 aa  383  1e-105  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_2533  acyl-CoA dehydrogenase domain protein  51.75 
 
 
382 aa  382  1e-105  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.769427  n/a   
 
 
-
 
NC_012793  GWCH70_1226  acyl-CoA dehydrogenase domain protein  49.07 
 
 
381 aa  382  1e-105  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2106  acyl-CoA dehydrogenase domain protein  49.6 
 
 
381 aa  380  1e-104  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013441  Gbro_0451  acyl-CoA dehydrogenase domain protein  48.19 
 
 
382 aa  380  1e-104  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_3810  acyl-CoA dehydrogenase-like  51.47 
 
 
381 aa  380  1e-104  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.409064  normal 
 
 
-
 
NC_009524  PsycPRwf_1187  acyl-CoA dehydrogenase domain-containing protein  50.13 
 
 
383 aa  379  1e-104  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_4090  acyl-CoA dehydrogenase domain-containing protein  46.88 
 
 
380 aa  375  1e-103  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_1193  acyl-CoA dehydrogenase-like  53.42 
 
 
381 aa  377  1e-103  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_007794  Saro_0132  long-chain acyl-CoA dehydrogenase  49.22 
 
 
384 aa  377  1e-103  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B2741  putative acyl-CoA dehydrogenase  47.24 
 
 
379 aa  375  1e-103  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_1998  acyl-CoA dehydrogenase domain-containing protein  50.67 
 
 
390 aa  376  1e-103  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_5437  long-chain-acyl-CoA dehydrogenase  51.31 
 
 
387 aa  378  1e-103  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_2530  acyl-CoA dehydrogenase-like protein  48.03 
 
 
378 aa  372  1e-102  Cupriavidus metallidurans CH34  Bacteria  normal  0.204143  normal  0.36456 
 
 
-
 
NC_009511  Swit_1764  acyl-CoA dehydrogenase domain-containing protein  49.48 
 
 
380 aa  373  1e-102  Sphingomonas wittichii RW1  Bacteria  normal  0.937718  normal 
 
 
-
 
NC_013131  Caci_5263  acyl-CoA dehydrogenase domain protein  50.67 
 
 
381 aa  372  1e-102  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.603823  normal 
 
 
-
 
NC_013440  Hoch_5486  acyl-CoA dehydrogenase domain protein  47.79 
 
 
381 aa  369  1e-101  Haliangium ochraceum DSM 14365  Bacteria  normal  0.361587  normal  0.275815 
 
 
-
 
NC_007348  Reut_B3500  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  50 
 
 
385 aa  369  1e-101  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_2531  acyl-CoA dehydrogenase-like protein  48.82 
 
 
379 aa  371  1e-101  Cupriavidus metallidurans CH34  Bacteria  normal  0.0679448  normal  0.373155 
 
 
-
 
NC_010338  Caul_0446  acyl-CoA dehydrogenase domain-containing protein  52.28 
 
 
380 aa  365  1e-100  Caulobacter sp. K31  Bacteria  normal  0.111299  normal 
 
 
-
 
NC_007969  Pcryo_1537  acyl-CoA dehydrogenase-like  48.82 
 
 
383 aa  366  1e-100  Psychrobacter cryohalolentis K5  Bacteria  normal  0.360531  normal  0.748727 
 
 
-
 
NC_007974  Rmet_5507  long-chain-acyl-CoA dehydrogenase  48 
 
 
385 aa  365  1e-100  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_4558  acyl-CoA dehydrogenase domain-containing protein  46.89 
 
 
393 aa  363  3e-99  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.0623628 
 
 
-
 
NC_007953  Bxe_C0279  long-chain acyl-CoA dehydrogenase  50.26 
 
 
380 aa  363  3e-99  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3147  acyl-CoA dehydrogenase domain-containing protein  45.34 
 
 
382 aa  362  9e-99  Frankia sp. EAN1pec  Bacteria  normal  0.880335  normal 
 
 
-
 
NC_008786  Veis_2938  acyl-CoA dehydrogenase domain-containing protein  46.46 
 
 
379 aa  360  3e-98  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.282109  normal 
 
 
-
 
NC_010501  PputW619_3347  acyl-CoA dehydrogenase domain-containing protein  49.34 
 
 
381 aa  358  9.999999999999999e-98  Pseudomonas putida W619  Bacteria  normal  0.188743  normal  0.997042 
 
 
-
 
NC_008699  Noca_0271  acyl-CoA dehydrogenase domain-containing protein  45.45 
 
 
381 aa  358  9.999999999999999e-98  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
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