Gene Veis_4102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_4102 
Symbol 
ID4695148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp4500408 
End bp4501574 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content66% 
IMG OID639851849 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_998825 
Protein GI121611018 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.757866 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.974192 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAAC GCAGCTTGTT CCGGCCCGAG CACCAGGCAT TTGCCGACAG CTTTCGCCGC 
TTCATCGACA AAGAAATCAG CCCGCACCAC GCAGCATGGG AAGACCAGGG CCATGTCAGC
CGCGAGGTCT GGCAGCAGGC CGGCGCGAAC GGCTTTTTGT GCATGAGCAT GCCCGAGGAA
TACGGCGGCG CCGGGGCCGA CCAGCTCTAC GCCGTCGCGC AAATCGAAGA AATCGCCCGC
GCCGGCTGCA CCGGCATCGG CTTCGGGCTG CACAGCGAGA TCGTCGCGCC CTACATCCTG
CGCTACGGCA GCGCAGAGCA AAAATCCAGA TACCTGCCGC CAATGGCCAG CGGGGCCATG
ATCGGCGCCA TCGCGATGAG CGAGCCGGCC GCCGGCAGCG ACCTGCAAGG CATCCAGACC
CAGGCCATTC AAAGCGCGGA CGGCAGCCAC TATCTGCTGC GCGGCAGCAA AACCTTCATC
ACCAACGGCT GGCATGCCGA CCTGGTGATC GTGGTGGCCA AGACCGACCC GGCCGCCGGC
GCCAAGGGCA TCAGCTTGCT GCTCGTCGAA CGCGGCATGC CGGGCTTCGA GGCAGGCCGG
CGCCTGAAAA AGGTGGGGCT GAAGGCACAG GACACCGCCG AGCTGTTCTT CGACAACGTG
CGCGTGCCCG CCGGGAACCT GCTGGGCGGC CCCGCGCTGC AAGGGCGCGG CTTCATCTGC
CTGATGGAGC AGTTGCCCTG GGAGCGCCTG CAGATCGCCA TCACCGCCGT GGCCGCAGCC
CAGGCCGCGA TCGACTCGAC GGTGGACTAC GTCAAACAGC GCCAGGTGTT CGGCCAGCCC
GTGGCCGCGT TCCAGAACAC GCGCTACACC CTGGCCGAGC TACAGACCGA GGTGCAGGTG
GCGCGCGTGT TCGTCGACAA ATGCTGCGAA CTGCTGCTGC AACAAAAGCT CGACAGCGCC
AGCGCCAGCA TGGCCAAGTA CTGGACCACC GACCTGCAAT GCAAGGTCAT GGACGAATGC
GTGCAACTGC ACGGCGGCTA CGGCTACATG TGGGAATACC CGATCGCCCG CGCCTACGCC
GACGCGCGCG TGCAGCGCAT CTATGGCGGC ACCAACGAAA TCATGAAAGA AGTGATCGCG
CGCGCGATGG GACTTTCCGG CCGCTGA
 
Protein sequence
MIERSLFRPE HQAFADSFRR FIDKEISPHH AAWEDQGHVS REVWQQAGAN GFLCMSMPEE 
YGGAGADQLY AVAQIEEIAR AGCTGIGFGL HSEIVAPYIL RYGSAEQKSR YLPPMASGAM
IGAIAMSEPA AGSDLQGIQT QAIQSADGSH YLLRGSKTFI TNGWHADLVI VVAKTDPAAG
AKGISLLLVE RGMPGFEAGR RLKKVGLKAQ DTAELFFDNV RVPAGNLLGG PALQGRGFIC
LMEQLPWERL QIAITAVAAA QAAIDSTVDY VKQRQVFGQP VAAFQNTRYT LAELQTEVQV
ARVFVDKCCE LLLQQKLDSA SASMAKYWTT DLQCKVMDEC VQLHGGYGYM WEYPIARAYA
DARVQRIYGG TNEIMKEVIA RAMGLSGR