Gene Mvan_2439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_2439 
Symbol 
ID4647683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp2594212 
End bp2595387 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content64% 
IMG OID639805922 
Productlong-chain-acyl-CoA dehydrogenase 
Protein accessionYP_953258 
Protein GI120403429 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0991983 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0569635 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGCAT CAGAAGCCAA GCCAGTCATC GCTTACGAAC GCACGCTGTT CGAGCCCGAG 
CACGACATGT TCCGGGAGTC GTTCCGCGCC TTTCTCGACC GCCACGTCGC CCCACATCAC
GAGGAGTGGG AGAAGAACAA GCTCGTCGAC CGGGACGTGT GGCTGGAGGC GGGCAAACAG
GGCTTCCTGG GAATGGCGGT GCCCGAGGAG TACGGCGGCG GCGGGGTCGA CGATTTCCGC
TACAACACCA TCGTCACCGA GGAGGTGACC GCAGGCCGGT ACACCGGCCT GGGGTTCAGC
CTGCACAACG ACGTCGCGGC GCCGTACCTG ATCCGGTTGG CCACCGAAGA GCAGAAGCAA
CGGTGGCTGC CGAAGTTCTG CAGTGGCGAG ATCATCTCCG CGATCGCGAT GACCGAGCCG
GGCACCGGCA GTGACCTGCA GGGCATCAAG ACGCGCGCGG TCCGGGACGG CGATCACTAC
GTCCTCAACG GGGCGAAGAC CTTCATCACC AACGGAATCC ACTCCGATCT GGTGATCGTG
GTCGCCCAGA CGGACCCGGA CAAGGGCGCG CTGGGCTTCT CGCTGTTGGT CGTCGAGCGC
GGTATGGCGG GCTTCGAACG CGGCCGCAAA CTCGACAAGA TCGGCCTCGA CGCGCAGGAC
ACCGCCGAGT TGTCGTTCAC CGATGTCAAG GTGCCCGTGG AGAACCTGCT GGGCGAGGAG
GGCCAGGGCT TCATCTACCT GATGCAGAAC CTGCCGCAGG AACGCATCAG CATCGCGATC
ATGGCGGCGG CGGCGATGGA GGCCGTGCTC GACGTGACAT TGCAGTACAC CAAGGAGCGC
AAGGCATTCG GCAGGCCCAT CGGGAGCCAG CAGAACAGCC GTTTCCTGCT GGCCGAGCTG
TCCACCGAGG CGACCGTGGT GCGGATGATG GTCGACGAGT TCATCAAGCT GCACCTGCAG
GACAAGCTCA CCGTCGAGCA GGCGGCGATG GCCAAGTGGT ACTCCACCGA GAAGCAGGTC
CACCTCATCG ATCGTTGCCT GCAACTGCAC GGCGGGTACG GATACATGCG GGAGTACGAC
GTCGCGCGCG CATATCTCGA TGCCCGCGTG CAGACCATCT ACGGGGGCAC CACCGAGATC
ATGAAAGAGA TCATCGGCCG TAGTCTCGGC GTCTGA
 
Protein sequence
MGASEAKPVI AYERTLFEPE HDMFRESFRA FLDRHVAPHH EEWEKNKLVD RDVWLEAGKQ 
GFLGMAVPEE YGGGGVDDFR YNTIVTEEVT AGRYTGLGFS LHNDVAAPYL IRLATEEQKQ
RWLPKFCSGE IISAIAMTEP GTGSDLQGIK TRAVRDGDHY VLNGAKTFIT NGIHSDLVIV
VAQTDPDKGA LGFSLLVVER GMAGFERGRK LDKIGLDAQD TAELSFTDVK VPVENLLGEE
GQGFIYLMQN LPQERISIAI MAAAAMEAVL DVTLQYTKER KAFGRPIGSQ QNSRFLLAEL
STEATVVRMM VDEFIKLHLQ DKLTVEQAAM AKWYSTEKQV HLIDRCLQLH GGYGYMREYD
VARAYLDARV QTIYGGTTEI MKEIIGRSLG V