| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2461 |
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| Symbol | |
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| ID | 5539942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3161679 |
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| End bp | 3162824 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640894591 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001432559 |
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| Protein GI | 156742430 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.160964 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCA CGCTGTTTGA ACCGGAACAC GACCTCTTCC GCGCCGCCTT TCGCGCCTTT
ATCGAACGCG AGATTGCGCC GTTTCACGCG GAATGGGAGC GCGCCGGCGC CGTCCCGCGC
GACCTGTGGC GATCAGCCGG TCGCCAGGGG TTCCTCTGCA TGGACGCGCC GGAGGAGTAT
GGCGGCGCCG GCGCGCGCGA TTACCGCTTC AACGTTGTCA TTGGCGAAGA GTTGTGGCGC
ATCGGCGCAA CCGGTCCCGG CTTTGTCCTG CACAGCGATA TCGTGGTTCC CTACCTCTTA
TGCTACGGGA CGTCGGAGCA GCACCGGCGC TGGCTGCCCG GCTGCGTCAG CGGCGAGTGC
ATTACTGCCA TTGCGATGAC GGAACCGGGC GCCGGCAGCG ACCTGGCAGC CATCCGCACC
ACGGCGCTGC GCGATGGCGA CGCGTATGTG CTGAACGGGC AGAAGACGTT TATCTCCAAT
GGCATCCTCA ACGATCTCGT GATCGTTGCG GCAAAGACCG ATCCGGATCG CGGCGCCAAG
GGAGTCAGTC TGCTTGTTGT CGAGCGTGGC ATGCCGGGAT ATGAACGCGG CAGACGCCTG
GAGAAGATCG GGTTGCACGC GCAGGACACC GCCGAACTGT TTTTTCACAA TGTGCGCGTG
CCGCGTGAGA ACCTGCTCGG TGAAGAAGGG CAGGGCTTCC GTTATCTGAT GGAACAGTTG
CCGCGTGAAC GTCTCGCTAT CGCGGTCGGC GCCGTGGCTG CCGCAGAAAC GGCGCTGGAA
CAGACCATCC GCTACTGCCG TGAGCGTGAA GTGTTCGGTC GTCCACTCGG CGCACTTCAG
ACGGTGCGTT TCACGCTGGC GGAACTGGCG ACCGAGGTGC AGATCGGGCG CGTGTTTGTC
GATCAGTGCG TGCTGGCGCT CAACCGGGGT GAGTTGACGG CAGAAACCGC AGCCATGGCA
AAATGGTGGA CGACCGAACT CCAGCAGCGG GTCGTCGGCG CCTGCCTGCA ACTGCACGGT
GGCTATGGTT ACATGCGCGA ATATCCGATT GCGCGCGCCT TCCTCGATGC GCGCGTGCAG
ACAATCTACG GCGGCACAAC CGAGATTATG AAGGAGATCA TCGGAAGATC GCTAAAACTG
GAGTAA
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| Protein sequence | MKRTLFEPEH DLFRAAFRAF IEREIAPFHA EWERAGAVPR DLWRSAGRQG FLCMDAPEEY
GGAGARDYRF NVVIGEELWR IGATGPGFVL HSDIVVPYLL CYGTSEQHRR WLPGCVSGEC
ITAIAMTEPG AGSDLAAIRT TALRDGDAYV LNGQKTFISN GILNDLVIVA AKTDPDRGAK
GVSLLVVERG MPGYERGRRL EKIGLHAQDT AELFFHNVRV PRENLLGEEG QGFRYLMEQL
PRERLAIAVG AVAAAETALE QTIRYCRERE VFGRPLGALQ TVRFTLAELA TEVQIGRVFV
DQCVLALNRG ELTAETAAMA KWWTTELQQR VVGACLQLHG GYGYMREYPI ARAFLDARVQ
TIYGGTTEIM KEIIGRSLKL E
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