Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_49080 |
Symbol | |
ID | 4384488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 4359137 |
End bp | 4360276 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639326514 |
Product | putative acyl-CoA dehydrogenase |
Protein accession | YP_792079 |
Protein GI | 116049119 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0000217438 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAACGGC AGATCTTCGA GACCGAACAC AACCTGTTCC GCGATGCCTT CCGCGCCTTT CTCGACAAAG AGGTGGTGCC GCACCAGGAC GCCTGGGAAG AGGCCGGGGT GGTCGACCGC GCTGTCTGGA GGAAGGCGGG GGAGATGGGC TTCCTGCTGC CCTGGGCGGA CGAGGAGTAC GGTGGCGCCG GGCTCAAGGA CTTCCGCTAC GAGCAGATCA TGTGCGAGGA GCTGGCGCGG ATCAACGAAC CGGGCTTCAT GATCCCGCTG CACTCGGCGT TGTGCGGGCC GTACATCGCC GAATACGGTA GCGCCGAGCA GAAGGCCCGC CTGTTGCCGG GGATCGTCCG TGGCGAGACC ATCCTCGCCG TGGCCATGAC CGAGCCGTCC GCCGGCTCCG ACCTGGCCGG CATGCGCAGC ACCGCGGTGG ACAAGGGCGA CCACTGGCTG CTCAACGGCT CCAAGGTGTT CATCTCCAAC GGCCTGCTGG CCGACCTGGT GATCGTCGCG GCGAAGACCG ATCCGGCGAA CAAGCACGCC ATGGGCCTGT TCCTGGTGGA GCGCGGCATG CAAGGCTTCG AGCGCGGGCG CAACCTGAAG AAGCTCGGCA TGAAGAGCCA GGACACCGCC GAGCTGTTCT TCAACAATGT GCGGGTGCCG AAGGAAAACC TGCTGGGCGA CGCCAAGGGC GGCTTCTTCT ACCTGATGAA CATGCTCGCC CAGGAACGCC TGACCAACGC CTGCGGCGCG GTGGCCGGGG CCGAGGCGGC GTTGCAGGCG ACCATCGATT ACGTGAAGGA GCGCCAGGCC TTCGGCCGGC CGGTGGCGCA CTTCCAGAAC ACCCGCTTCA AGCTCGCCGA AATGCGTACC CAGATCGACG TGGCGCAGGT TTTCACCGAC CGCTGCGTGA TGGACCACAA CCAGAAGAAG CTGTCCCCCG AGGTCGCCGC CGAAGCCAAG CTGTTCACCA CCGAGCTGCT GGGCAAGGTG GTCGACGAAG GCGTGCAACT GCATGGCGGC TGGGGCTACA TGTGGGAGTA TCCGATTTGC AGGATGTACG CCAACGCCCG CATCCAGCGG ATCTTCGCCG GTACCTCGGA GATCATGAAA GAGATCATCA GCCGCGGCAT GAAGCTCTGA
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Protein sequence | MQRQIFETEH NLFRDAFRAF LDKEVVPHQD AWEEAGVVDR AVWRKAGEMG FLLPWADEEY GGAGLKDFRY EQIMCEELAR INEPGFMIPL HSALCGPYIA EYGSAEQKAR LLPGIVRGET ILAVAMTEPS AGSDLAGMRS TAVDKGDHWL LNGSKVFISN GLLADLVIVA AKTDPANKHA MGLFLVERGM QGFERGRNLK KLGMKSQDTA ELFFNNVRVP KENLLGDAKG GFFYLMNMLA QERLTNACGA VAGAEAALQA TIDYVKERQA FGRPVAHFQN TRFKLAEMRT QIDVAQVFTD RCVMDHNQKK LSPEVAAEAK LFTTELLGKV VDEGVQLHGG WGYMWEYPIC RMYANARIQR IFAGTSEIMK EIISRGMKL
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