Gene PA14_49080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_49080 
Symbol 
ID4384488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4359137 
End bp4360276 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content65% 
IMG OID639326514 
Productputative acyl-CoA dehydrogenase 
Protein accessionYP_792079 
Protein GI116049119 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0000217438 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAACGGC AGATCTTCGA GACCGAACAC AACCTGTTCC GCGATGCCTT CCGCGCCTTT 
CTCGACAAAG AGGTGGTGCC GCACCAGGAC GCCTGGGAAG AGGCCGGGGT GGTCGACCGC
GCTGTCTGGA GGAAGGCGGG GGAGATGGGC TTCCTGCTGC CCTGGGCGGA CGAGGAGTAC
GGTGGCGCCG GGCTCAAGGA CTTCCGCTAC GAGCAGATCA TGTGCGAGGA GCTGGCGCGG
ATCAACGAAC CGGGCTTCAT GATCCCGCTG CACTCGGCGT TGTGCGGGCC GTACATCGCC
GAATACGGTA GCGCCGAGCA GAAGGCCCGC CTGTTGCCGG GGATCGTCCG TGGCGAGACC
ATCCTCGCCG TGGCCATGAC CGAGCCGTCC GCCGGCTCCG ACCTGGCCGG CATGCGCAGC
ACCGCGGTGG ACAAGGGCGA CCACTGGCTG CTCAACGGCT CCAAGGTGTT CATCTCCAAC
GGCCTGCTGG CCGACCTGGT GATCGTCGCG GCGAAGACCG ATCCGGCGAA CAAGCACGCC
ATGGGCCTGT TCCTGGTGGA GCGCGGCATG CAAGGCTTCG AGCGCGGGCG CAACCTGAAG
AAGCTCGGCA TGAAGAGCCA GGACACCGCC GAGCTGTTCT TCAACAATGT GCGGGTGCCG
AAGGAAAACC TGCTGGGCGA CGCCAAGGGC GGCTTCTTCT ACCTGATGAA CATGCTCGCC
CAGGAACGCC TGACCAACGC CTGCGGCGCG GTGGCCGGGG CCGAGGCGGC GTTGCAGGCG
ACCATCGATT ACGTGAAGGA GCGCCAGGCC TTCGGCCGGC CGGTGGCGCA CTTCCAGAAC
ACCCGCTTCA AGCTCGCCGA AATGCGTACC CAGATCGACG TGGCGCAGGT TTTCACCGAC
CGCTGCGTGA TGGACCACAA CCAGAAGAAG CTGTCCCCCG AGGTCGCCGC CGAAGCCAAG
CTGTTCACCA CCGAGCTGCT GGGCAAGGTG GTCGACGAAG GCGTGCAACT GCATGGCGGC
TGGGGCTACA TGTGGGAGTA TCCGATTTGC AGGATGTACG CCAACGCCCG CATCCAGCGG
ATCTTCGCCG GTACCTCGGA GATCATGAAA GAGATCATCA GCCGCGGCAT GAAGCTCTGA
 
Protein sequence
MQRQIFETEH NLFRDAFRAF LDKEVVPHQD AWEEAGVVDR AVWRKAGEMG FLLPWADEEY 
GGAGLKDFRY EQIMCEELAR INEPGFMIPL HSALCGPYIA EYGSAEQKAR LLPGIVRGET
ILAVAMTEPS AGSDLAGMRS TAVDKGDHWL LNGSKVFISN GLLADLVIVA AKTDPANKHA
MGLFLVERGM QGFERGRNLK KLGMKSQDTA ELFFNNVRVP KENLLGDAKG GFFYLMNMLA
QERLTNACGA VAGAEAALQA TIDYVKERQA FGRPVAHFQN TRFKLAEMRT QIDVAQVFTD
RCVMDHNQKK LSPEVAAEAK LFTTELLGKV VDEGVQLHGG WGYMWEYPIC RMYANARIQR
IFAGTSEIMK EIISRGMKL