Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1193 |
Symbol | |
ID | 3903467 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 1424950 |
End bp | 1426095 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637878524 |
Product | acyl-CoA dehydrogenase-like |
Protein accession | YP_480300 |
Protein GI | 86739900 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTACC GATCATCGTG GATGACCGAG GAGCTCGACC AGCTCCAAAA CCTCACCCGC ACCTTCCTGG CCAAGGAATC CGAACCCAAC CACGGGCGGT GGACCGAGCA GCACGCGGTC GACCGCGAGT TCTGGAACAA GGCCGGCGAG ATCGGCCTGC TGTGCATCAG CTGCCCCATT GAGTACGGCG GCGGTGGCGG CACGTTCGCG CACGAGGCCG TGGTGTTGCG CGAGCAGGGC TACATCGCCG ACGACTGCTG GGCCTACCTG GTGCACAGCC CGATCGTCGC GCACTACATC AACGCCTACG GCAACCACGA GCAGAAGCAG CGCTGGCTGC CCAGACTGGC GTCCGGTGAG TTCGTCGGCG CGATCGCGAT GACCGAACCG GGCACCGGTA GCGACCTGCA GGCCGTGCGC ACCACCGCCC GGCGTGAGGG TGACCATTAC GTGATCAACG GTGCAAAGAC GTTCATCACC AACGGTACCC ACTGTGACCT GCTCATCATC GTGGCCCGCA CCGGCAACGC GCCCGGCGGC AGAGGGCTGT CGCTGATCGT GGCGGAAACC CAGGGGCTGC CGGGGTTCGA ACGCGGCCGG GTGCTGCAGA AGATCGGCGC GATGGGCACC GACACCCGCG AGCTGGCCTT CACCGACATG CGGGTGCCTG CGGTCAACCT GCTCGGTCCG GCCGAGGGCC AAGGCTTCGT GCAGCTGGTA CAGCAGCTGC CGCAGGAACG GCTGTCCATC GCGGTGAATG CCGCGGCCGC CGCCGAACAC GCCGTCGACT TGGCCATCGC CTACGCCAAG GAGCGCACGG CGTTCGGCAA ACCCCTGCTG GAATTCCAGA ACACCCGGTT CGTGCTCGCC GAGTGCCGTA CCGAAGCGCT GGCGCTGCGC ACCTTCATCG ACCACTGCAT CACCGAGCAT GTGGCCGGCC GGCTCGACGG AGCAACCGCG TCCATGGCCA AATACCTGGC CACCGACAAG CAGTGCGAGA TCGTCGACCG CTGCCTACAG ATCTTCGGCG GCTACGGCTA CATGACCGAG TACCCCATCG CCCGCATGTA CGCCGCCGCC CGCGTCCAGA GGATCTACGG CGGCACCAAC GAAATCATGA AGGAGCTCAT CGCCCGCTCC CTCTGA
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Protein sequence | MTYRSSWMTE ELDQLQNLTR TFLAKESEPN HGRWTEQHAV DREFWNKAGE IGLLCISCPI EYGGGGGTFA HEAVVLREQG YIADDCWAYL VHSPIVAHYI NAYGNHEQKQ RWLPRLASGE FVGAIAMTEP GTGSDLQAVR TTARREGDHY VINGAKTFIT NGTHCDLLII VARTGNAPGG RGLSLIVAET QGLPGFERGR VLQKIGAMGT DTRELAFTDM RVPAVNLLGP AEGQGFVQLV QQLPQERLSI AVNAAAAAEH AVDLAIAYAK ERTAFGKPLL EFQNTRFVLA ECRTEALALR TFIDHCITEH VAGRLDGATA SMAKYLATDK QCEIVDRCLQ IFGGYGYMTE YPIARMYAAA RVQRIYGGTN EIMKELIARS L
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