More than 300 homologs were found in PanDaTox collection
for query gene Francci3_1193 on replicon NC_007777
Organism: Frankia sp. CcI3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007777  Francci3_1193  acyl-CoA dehydrogenase-like  100 
 
 
381 aa  789    Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_4117  acyl-CoA dehydrogenase domain protein  65.17 
 
 
386 aa  501  1e-141  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_5666  acyl-CoA dehydrogenase domain protein  62.17 
 
 
381 aa  494  9.999999999999999e-139  Actinosynnema mirum DSM 43827  Bacteria  normal  0.764925  n/a   
 
 
-
 
NC_013159  Svir_24700  acyl-CoA dehydrogenase  60.7 
 
 
373 aa  465  9.999999999999999e-131  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.791758  normal 
 
 
-
 
NC_011004  Rpal_1187  acyl-CoA dehydrogenase domain protein  60.21 
 
 
381 aa  463  1e-129  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_2001  acyl-CoA dehydrogenase domain protein  59.95 
 
 
366 aa  464  1e-129  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_4601  acyl-CoA dehydrogenase domain-containing protein  59.26 
 
 
381 aa  455  1e-127  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B3552  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  57.74 
 
 
396 aa  455  1e-127  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_5152  putative acyl-CoA dehydrogenase  56.43 
 
 
381 aa  456  1e-127  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.276621 
 
 
-
 
NC_007778  RPB_4074  Acyl-CoA dehydrogenase-like  59.16 
 
 
381 aa  452  1.0000000000000001e-126  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.23521 
 
 
-
 
NC_008146  Mmcs_3185  acyl-CoA dehydrogenase-like protein  57.03 
 
 
381 aa  452  1.0000000000000001e-126  Mycobacterium sp. MCS  Bacteria  normal  0.470854  n/a   
 
 
-
 
NC_009077  Mjls_3197  acyl-CoA dehydrogenase domain-containing protein  57.03 
 
 
381 aa  452  1.0000000000000001e-126  Mycobacterium sp. JLS  Bacteria  normal  0.107231  normal 
 
 
-
 
NC_008705  Mkms_3247  acyl-CoA dehydrogenase domain-containing protein  57.03 
 
 
381 aa  452  1.0000000000000001e-126  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3810  acyl-CoA dehydrogenase-like  58.9 
 
 
381 aa  449  1e-125  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.409064  normal 
 
 
-
 
NC_007348  Reut_B4753  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  56.27 
 
 
382 aa  446  1.0000000000000001e-124  Ralstonia eutropha JMP134  Bacteria  normal  0.231172  n/a   
 
 
-
 
NC_013131  Caci_5263  acyl-CoA dehydrogenase domain protein  58.99 
 
 
381 aa  447  1.0000000000000001e-124  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.603823  normal 
 
 
-
 
NC_009719  Plav_0463  acyl-CoA dehydrogenase domain-containing protein  56.99 
 
 
385 aa  443  1e-123  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.547783  normal 
 
 
-
 
NC_010338  Caul_0130  acyl-CoA dehydrogenase domain-containing protein  60.63 
 
 
387 aa  442  1e-123  Caulobacter sp. K31  Bacteria  normal  0.654593  normal 
 
 
-
 
NC_012792  Vapar_5772  acyl-CoA dehydrogenase domain protein  56.53 
 
 
388 aa  439  9.999999999999999e-123  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_2533  acyl-CoA dehydrogenase domain protein  56.35 
 
 
382 aa  437  1e-121  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.769427  n/a   
 
 
-
 
NC_009952  Dshi_0838  acyl-CoA dehydrogenase domain protein  53.83 
 
 
382 aa  430  1e-119  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.541206 
 
 
-
 
NC_008044  TM1040_1559  acyl-CoA dehydrogenase-like  54.05 
 
 
387 aa  430  1e-119  Ruegeria sp. TM1040  Bacteria  normal  normal  0.456319 
 
 
-
 
NC_009511  Swit_1998  acyl-CoA dehydrogenase domain-containing protein  56.15 
 
 
390 aa  421  1e-116  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_007509  Bcep18194_C7184  Acyl-CoA dehydrogenase  55 
 
 
384 aa  411  1e-113  Burkholderia sp. 383  Bacteria  normal  normal  0.0110483 
 
 
-
 
NC_009921  Franean1_2942  acyl-CoA dehydrogenase domain-containing protein  57.26 
 
 
389 aa  408  1e-113  Frankia sp. EAN1pec  Bacteria  normal  0.218969  normal 
 
 
-
 
NC_008347  Mmar10_0539  acyl-CoA dehydrogenase domain-containing protein  53.76 
 
 
388 aa  409  1e-113  Maricaulis maris MCS10  Bacteria  normal  0.191308  normal  0.162597 
 
 
-
 
NC_007492  Pfl01_4696  Acyl-CoA dehydrogenase-like  54.01 
 
 
378 aa  407  1.0000000000000001e-112  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.0700778  normal  0.0611001 
 
 
-
 
NC_009524  PsycPRwf_1187  acyl-CoA dehydrogenase domain-containing protein  53.56 
 
 
383 aa  405  1.0000000000000001e-112  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_3347  acyl-CoA dehydrogenase domain-containing protein  54.09 
 
 
381 aa  402  1e-111  Pseudomonas putida W619  Bacteria  normal  0.188743  normal  0.997042 
 
 
-
 
NC_009656  PSPA7_5007  acyl-CoA dehydrogenase  53.13 
 
 
378 aa  397  1e-109  Pseudomonas aeruginosa PA7  Bacteria  normal  0.284133  n/a   
 
 
-
 
NC_009439  Pmen_0898  acyl-CoA dehydrogenase domain-containing protein  53.95 
 
 
379 aa  393  1e-108  Pseudomonas mendocina ymp  Bacteria  normal  0.592416  normal 
 
 
-
 
NC_007969  Pcryo_1537  acyl-CoA dehydrogenase-like  52.77 
 
 
383 aa  392  1e-108  Psychrobacter cryohalolentis K5  Bacteria  normal  0.360531  normal  0.748727 
 
 
-
 
NC_008740  Maqu_2399  acyl-CoA dehydrogenase domain-containing protein  53.64 
 
 
379 aa  394  1e-108  Marinobacter aquaeolei VT8  Bacteria  normal  0.470639  n/a   
 
 
-
 
NC_007974  Rmet_5507  long-chain-acyl-CoA dehydrogenase  49.34 
 
 
385 aa  390  1e-107  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_0443  acyl-CoA dehydrogenase domain protein  53.42 
 
 
385 aa  389  1e-107  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_0697  acyl-CoA dehydrogenase domain-containing protein  52.76 
 
 
380 aa  385  1e-106  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_3014  acyl-CoA dehydrogenase-like  51.45 
 
 
389 aa  386  1e-106  Polaromonas sp. JS666  Bacteria  normal  0.51583  normal  0.368309 
 
 
-
 
NC_007908  Rfer_0994  acyl-CoA dehydrogenase-like  51.71 
 
 
382 aa  384  1e-105  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1015  acyl-CoA dehydrogenase domain-containing protein  52.55 
 
 
381 aa  382  1e-105  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.629454 
 
 
-
 
NC_008740  Maqu_2118  acyl-CoA dehydrogenase domain-containing protein  51.34 
 
 
382 aa  384  1e-105  Marinobacter aquaeolei VT8  Bacteria  normal  0.0463825  n/a   
 
 
-
 
NC_012857  Rpic12D_3850  acyl-CoA dehydrogenase domain protein  52.28 
 
 
380 aa  380  1e-104  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_2632  acyl-CoA dehydrogenase domain protein  50.92 
 
 
381 aa  380  1e-104  Ralstonia pickettii 12J  Bacteria  normal  0.49444  normal  0.97315 
 
 
-
 
NC_010678  Rpic_4927  acyl-CoA dehydrogenase domain protein  52.28 
 
 
380 aa  380  1e-104  Ralstonia pickettii 12J  Bacteria  normal  normal  0.905693 
 
 
-
 
NC_014165  Tbis_0526  acyl-CoA dehydrogenase domain-containing protein  52.28 
 
 
381 aa  380  1e-104  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0149792 
 
 
-
 
NC_007908  Rfer_2752  acyl-CoA dehydrogenase-like  51.46 
 
 
387 aa  377  1e-103  Rhodoferax ferrireducens T118  Bacteria  normal  0.171242  n/a   
 
 
-
 
NC_009511  Swit_1598  acyl-CoA dehydrogenase domain-containing protein  51.18 
 
 
383 aa  378  1e-103  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_3159  acyl-CoA dehydrogenase-like protein  49.87 
 
 
384 aa  378  1e-103  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_0103  acyl-CoA dehydrogenase domain-containing protein  51.06 
 
 
384 aa  371  1e-102  Acidovorax sp. JS42  Bacteria  normal  normal  0.250582 
 
 
-
 
NC_009080  BMA10247_2728  long-chain specific acyl-CoA dehydrogenase  52.94 
 
 
378 aa  374  1e-102  Burkholderia mallei NCTC 10247  Bacteria  normal  0.890874  n/a   
 
 
-
 
NC_007434  BURPS1710b_0285  putative acyl-CoA dehydrogenase  52.94 
 
 
430 aa  374  1e-102  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_0069  acyl-CoA dehydrogenase  52.94 
 
 
378 aa  374  1e-102  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3482  long-chain specific acyl-CoA dehydrogenase  52.94 
 
 
378 aa  374  1e-102  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_5024  putative acyl-CoA dehydrogenase  52.15 
 
 
379 aa  374  1e-102  Cupriavidus metallidurans CH34  Bacteria  hitchhiker  0.00000851023  normal  0.285012 
 
 
-
 
NC_008836  BMA10229_A1825  acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  52.94 
 
 
378 aa  374  1e-102  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_12737  acyl-CoA dehydrogenase fadE20  50.53 
 
 
386 aa  372  1e-102  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.416268 
 
 
-
 
NC_009074  BURPS668_0071  acyl-CoA dehydrogenase  52.94 
 
 
378 aa  374  1e-102  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_3613  acyl-CoA dehydrogenase domain-containing protein  50 
 
 
382 aa  373  1e-102  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_2439  long-chain-acyl-CoA dehydrogenase  51.05 
 
 
391 aa  372  1e-102  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0991983  normal  0.0569635 
 
 
-
 
NC_007348  Reut_B4166  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  51.34 
 
 
379 aa  368  1e-101  Ralstonia eutropha JMP134  Bacteria  normal  0.503131  n/a   
 
 
-
 
NC_007651  BTH_I0060  acyl-CoA dehydrogenase  52.41 
 
 
378 aa  370  1e-101  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0120  acyl-CoA dehydrogenase domain protein  51.06 
 
 
384 aa  369  1e-101  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_4102  acyl-CoA dehydrogenase domain-containing protein  52.73 
 
 
388 aa  365  1e-100  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.757866  normal  0.974192 
 
 
-
 
NC_010338  Caul_0446  acyl-CoA dehydrogenase domain-containing protein  51.58 
 
 
380 aa  365  1e-100  Caulobacter sp. K31  Bacteria  normal  0.111299  normal 
 
 
-
 
NC_010002  Daci_4827  acyl-CoA dehydrogenase domain-containing protein  51.06 
 
 
382 aa  361  9e-99  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_5486  acyl-CoA dehydrogenase domain protein  50.53 
 
 
381 aa  361  1e-98  Haliangium ochraceum DSM 14365  Bacteria  normal  0.361587  normal  0.275815 
 
 
-
 
NC_007794  Saro_0132  long-chain acyl-CoA dehydrogenase  47.73 
 
 
384 aa  360  2e-98  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_1764  acyl-CoA dehydrogenase domain-containing protein  50.95 
 
 
380 aa  360  2e-98  Sphingomonas wittichii RW1  Bacteria  normal  0.937718  normal 
 
 
-
 
NC_007952  Bxe_B2741  putative acyl-CoA dehydrogenase  48.03 
 
 
379 aa  358  9e-98  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B2724  putative acyl-CoA dehydrogenase  49.73 
 
 
379 aa  357  2.9999999999999997e-97  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_3923  acyl-CoA dehydrogenase domain protein  49.21 
 
 
381 aa  355  5e-97  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_1158  acyl-CoA dehydrogenase domain protein  48.27 
 
 
380 aa  353  4e-96  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007953  Bxe_C0602  putative acyl-CoA dehydrogenase  48.12 
 
 
374 aa  351  1e-95  Burkholderia xenovorans LB400  Bacteria  normal  0.0892135  normal  0.143827 
 
 
-
 
NC_013947  Snas_3899  acyl-CoA dehydrogenase domain-containing protein  47.49 
 
 
380 aa  350  2e-95  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.601021  normal 
 
 
-
 
NC_008146  Mmcs_3740  acyl-CoA dehydrogenase-like protein  48.82 
 
 
382 aa  349  4e-95  Mycobacterium sp. MCS  Bacteria  normal  0.421985  n/a   
 
 
-
 
NC_008705  Mkms_3813  acyl-CoA dehydrogenase domain-containing protein  48.82 
 
 
382 aa  349  4e-95  Mycobacterium sp. KMS  Bacteria  normal  normal  0.285243 
 
 
-
 
NC_009077  Mjls_3752  acyl-CoA dehydrogenase domain-containing protein  48.56 
 
 
382 aa  348  7e-95  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_1892  acyl-CoA dehydrogenase domain-containing protein  45.14 
 
 
378 aa  347  1e-94  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_4164  acyl-CoA dehydrogenase domain protein  51.52 
 
 
380 aa  347  2e-94  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_0666  acyl-CoA dehydrogenase  46.6 
 
 
386 aa  346  4e-94  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_1512  putative acyl-CoA dehydrogenase  50.4 
 
 
382 aa  340  2e-92  Thermobifida fusca YX  Bacteria  normal  0.116644  n/a   
 
 
-
 
NC_009511  Swit_1836  acyl-CoA dehydrogenase domain-containing protein  45.67 
 
 
385 aa  340  2e-92  Sphingomonas wittichii RW1  Bacteria  normal  0.306245  normal 
 
 
-
 
NC_007973  Rmet_2530  acyl-CoA dehydrogenase-like protein  48.66 
 
 
378 aa  340  2e-92  Cupriavidus metallidurans CH34  Bacteria  normal  0.204143  normal  0.36456 
 
 
-
 
NC_013131  Caci_1354  acyl-CoA dehydrogenase domain protein  47.14 
 
 
385 aa  340  2.9999999999999998e-92  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.70275 
 
 
-
 
NC_009921  Franean1_4286  acyl-CoA dehydrogenase domain-containing protein  48.15 
 
 
379 aa  338  8e-92  Frankia sp. EAN1pec  Bacteria  normal  normal  0.330894 
 
 
-
 
NC_009767  Rcas_2461  acyl-CoA dehydrogenase domain-containing protein  51.34 
 
 
381 aa  337  1.9999999999999998e-91  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.160964  normal 
 
 
-
 
NC_008726  Mvan_0906  acyl-CoA dehydrogenase domain-containing protein  46.7 
 
 
380 aa  337  1.9999999999999998e-91  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_4205  acyl-CoA dehydrogenase domain-containing protein  47.77 
 
 
382 aa  337  1.9999999999999998e-91  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_2531  acyl-CoA dehydrogenase-like protein  48.66 
 
 
379 aa  336  2.9999999999999997e-91  Cupriavidus metallidurans CH34  Bacteria  normal  0.0679448  normal  0.373155 
 
 
-
 
NC_009077  Mjls_4308  acyl-CoA dehydrogenase domain-containing protein  45.97 
 
 
380 aa  334  2e-90  Mycobacterium sp. JLS  Bacteria  normal  0.828452  normal 
 
 
-
 
NC_008146  Mmcs_4078  acyl-CoA dehydrogenase-like protein  45.97 
 
 
380 aa  334  2e-90  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4154  acyl-CoA dehydrogenase domain-containing protein  45.97 
 
 
380 aa  334  2e-90  Mycobacterium sp. KMS  Bacteria  normal  normal  0.815208 
 
 
-
 
NC_009523  RoseRS_2850  acyl-CoA dehydrogenase domain-containing protein  50.27 
 
 
381 aa  332  6e-90  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_4587  acyl-CoA dehydrogenase domain-containing protein  45.7 
 
 
380 aa  332  8e-90  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_2938  acyl-CoA dehydrogenase domain-containing protein  46.61 
 
 
379 aa  331  1e-89  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.282109  normal 
 
 
-
 
NC_013411  GYMC61_2106  acyl-CoA dehydrogenase domain protein  46.21 
 
 
381 aa  331  1e-89  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_014158  Tpau_1850  acyl-CoA dehydrogenase domain protein  46.35 
 
 
385 aa  328  7e-89  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.090649  n/a   
 
 
-
 
NC_009338  Mflv_2446  acyl-CoA dehydrogenase domain-containing protein  46.75 
 
 
386 aa  327  2.0000000000000001e-88  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_1226  acyl-CoA dehydrogenase domain protein  45.65 
 
 
381 aa  327  2.0000000000000001e-88  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_2118  acyl-CoA dehydrogenase domain-containing protein  44.89 
 
 
380 aa  325  6e-88  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.438957 
 
 
-
 
NC_009077  Mjls_4090  acyl-CoA dehydrogenase domain-containing protein  44.09 
 
 
380 aa  319  6e-86  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
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