| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_4192 |
|---|
| Symbol | |
|---|
| ID | 5356489 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 4329622 |
|---|
| End bp | 4330761 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640813242 |
|---|
| Product | putative acyl-CoA dehydrogenase |
|---|
| Protein accession | YP_001349546 |
|---|
| Protein GI | 152989582 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.33798 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACGGC AGATCTTCGA GACCGAACAC AACCTGTTCC GCGATGCCTT CCGCGCCTTC
CTCCTCAAGG AGGTGGTGCC GCACCAGGAA GAATGGGAAG AGGCCGGTGT GGTCGATCGT
GGCGTGTGGG CCAAGGCGGG GGAGATGGGC TTCCTGCTGC CCTGGGCGGA CGAGGAATAC
GGCGGCGCCG GGCTCAAGGA TTTCCGCTAC GAGCAGATCA TGTGCGAGGA GCTGGCGCGG
ATCAACGAAC CGGGCTTCAT GATCCCGCTG CACTCGGCGC TGTGCGGCCC CTACATCGCC
GAGTACGGCA ACGCCGAGCA GAAGGCCCGC CTGTTGCCGG GGATCATCCG TGGCGAGACC
ATCCTCGCCG TGGCCATGAC CGAACCCGCC GCCGGATCCG ACCTGGCCGG CATGCGCAGC
ACCGCGGTGG ACAAGGGCGA CCATTGGTTG CTCAACGGCT CCAAGGTGTT CATCTCCAAC
GGCCTGCTGG CCGATGTGGT GATCGTCGCG GCGAAGACCG ACCCGGCGAA CCGGCACGCC
ATGGGCCTGT TCCTGGTGGA GCGCGGCATG GAGGGCTTCG AGCGCGGGCG CAACCTGAAG
AAGCTCGGCA TGAAGAGCCA GGACACCGCC GAGCTGTTCT TCAACAACGT GCGGGTGCCT
AAGGAAAACC TGCTGGGCGA CGCCAAGGGC GGCTTCTTCT ACCTGATGAA CATGCTCGCC
CAGGAGCGCC TGACCAACGC CTGCGGCGCG GTGGCCGGGG CCGAGGCGGC GCTGCAGGCG
ACCATCGACT ACGTGAAGGA GCGCCAGGCC TTCGGCCGGC CGGTGGCGCA CTTCCAGAAC
ACCCGCTTCA AGCTCGCCGA GATGCGTACC CAGATCGACG TGGCGCAGGT CTTCACCGAC
CGCTGCGTGA TGGACCACAA CCAGAAGAAG CTGACCCCGG AAGTCGCCGC CGAAGCCAAG
CTGTTCACCA CCGAGCTGCT GGGCAGGGTG GTCGACGAAG GCGTGCAGCT GCATGGCGGC
TGGGGCTACA TGTGGGAGTA CCCGATCTGC AGGATGTACG CGAATGCCCG TATCCAGCGG
ATCTTCGCCG GCACCTCGGA GATCATGAAG GAGATCATCA GCCGCGGCAT GAAGCTCTGA
|
|---|
| Protein sequence | MQRQIFETEH NLFRDAFRAF LLKEVVPHQE EWEEAGVVDR GVWAKAGEMG FLLPWADEEY
GGAGLKDFRY EQIMCEELAR INEPGFMIPL HSALCGPYIA EYGNAEQKAR LLPGIIRGET
ILAVAMTEPA AGSDLAGMRS TAVDKGDHWL LNGSKVFISN GLLADVVIVA AKTDPANRHA
MGLFLVERGM EGFERGRNLK KLGMKSQDTA ELFFNNVRVP KENLLGDAKG GFFYLMNMLA
QERLTNACGA VAGAEAALQA TIDYVKERQA FGRPVAHFQN TRFKLAEMRT QIDVAQVFTD
RCVMDHNQKK LTPEVAAEAK LFTTELLGRV VDEGVQLHGG WGYMWEYPIC RMYANARIQR
IFAGTSEIMK EIISRGMKL
|
|---|
| |