Gene Snas_3899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3899 
Symbol 
ID8885099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4165861 
End bp4167003 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content66% 
IMG OID 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_003512647 
Protein GI291301369 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.601021 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCGTG ACATCTTCAC CGACGAGCAC GACGCGTTCC GCGAAACCGC GCGCACCTTC 
GCCGAACGCG AGATCGTTCC GCACCACGGA CAGTGGGAGG AGGACGGACT GGTCCCACGG
GAACTGTGGA CGGCCGCCGG ACGGCAGGGC CTGCTGTGTG TGGACCTGCC GGAGAAGTAC
GGCGGCGCGG GCCTGGACGA CTTCCGCTAT CACGCGATCG TGGCCGAGGA GCTGGCCCGC
TCGCGTGCCA CCGGGGTGGG TTTCGTCGTC CACAACGACA TGGCCGTGCC CTACCTGAGC
CGGCTGGCCA CCGAGGAGCA GAAGGACCGC TGGTTCTCCG GACTGTGTGC CGGTGAGCTG
ATCGCGGCGA TCGCGATGTC CGAGCCCGGG GCGGGCAGTG ACCTGCAGGG GATCGCCACC
ACGGCGGTCC GCGACGGTGA GGACTATGTG CTCAATGGCC AGAAGACGTT CATCACCAAC
GGGATCCACG CCGACCTGGT GATCGTGCTG GCGCGCACCG ACCCCGAGGC CGCGCACCTG
GGGTTCTCGT TGTTCGCGGT GGAACGCGGC ATGGAGGGCT TCGAACGCGG CCGCAAGCTC
GACAAGATCG GCATGCGGGC GCAGGACACC GCGGAACTGT TCTTCAACGA CGTGCGGATC
CCGGCGGCCA ACCTGGTGGG GGAAGAGGGC AAGGGCTTCA TCTACCTGAT GGAGGGACTG
CCGCGCGAGC GGCTCGCGAT CGCCGTGGTC GGGCAGGCCG GTGCCGAGGC CGTGTTCGAC
GAGACCGTGG AGTACGTCCG CGGTCGCAAG GCGTTCGGGC GCAACATCGG CAAGTTCCAG
CACGTGCGGA TGACGATGGC CGAGATGAAG ACTGAGCTCC ACATCGGACG AACCTTTGTG
GATCAGTGCA TGCTCGCCCT CAACGCCGGT GAACTCGACG TCACCGAGGC GGCGATGAGC
AAGTGGTGGA TCACCGAGAT GCAGAAACGG GTCACCGACC AGTGCCTGCA ACTGCACGGC
GGCTACGGAT ACATGAGTGA GTACCCCATC GCCCAGGCCT ATCTGGACAC TCGCGCGCAG
ACCATCTACG GTGGTACCAC CGAGATCATG AAAGAGATCA TCGGCCGTTC CCTTGACCTC
TAG
 
Protein sequence
MRRDIFTDEH DAFRETARTF AEREIVPHHG QWEEDGLVPR ELWTAAGRQG LLCVDLPEKY 
GGAGLDDFRY HAIVAEELAR SRATGVGFVV HNDMAVPYLS RLATEEQKDR WFSGLCAGEL
IAAIAMSEPG AGSDLQGIAT TAVRDGEDYV LNGQKTFITN GIHADLVIVL ARTDPEAAHL
GFSLFAVERG MEGFERGRKL DKIGMRAQDT AELFFNDVRI PAANLVGEEG KGFIYLMEGL
PRERLAIAVV GQAGAEAVFD ETVEYVRGRK AFGRNIGKFQ HVRMTMAEMK TELHIGRTFV
DQCMLALNAG ELDVTEAAMS KWWITEMQKR VTDQCLQLHG GYGYMSEYPI AQAYLDTRAQ
TIYGGTTEIM KEIIGRSLDL