| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0443 |
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| Symbol | |
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| ID | 7970184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 484513 |
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| End bp | 485670 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644791046 |
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| Product | acyl-CoA dehydrogenase domain protein |
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| Protein accession | YP_002942372 |
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| Protein GI | 239813462 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGAAC GCACGCTTTT CAGCGCCGAC CACGAGGCCT TCCGCGACAG CTTCCGCCGC
TTCATGGACA AGGAGATCGC GCCCTTCCAC GAGGCGTGGG AAGAACGGGG CTACGTGGAC
CGCTCCGTGT GGTCCAAGGC CGGCGAGAAC GGCTTTCTCT GCATGGCGCT GCCCGAGGAC
TACGGCGGCG CGGGCGCCGA CCTGCTCTAT TCGGTGATCC AGTTCGAGGA ACTCTGGGCG
CGCGGCTTCA CGGGCATCGG CTTCGGGCTG CACAGCGAGA TCGTGGCGCC CTATGTCCTG
CGCTACGGCA CCGAGGCGCA GAAGCAGCAC TACCTGCCCA GGCTCGCGAG CGGCGAGATG
GTCGGCGCCA TCGCGATGAG CGAGCCCGGC GCGGGCAGCG ACCTGCAGGC GGTCAAGACC
AGCGCCATCC GCCAGGCCGA CGGCAGCTAC CTGCTCAATG GCAGCAAGAC CTTCATCACC
AACGGCTGGC ACGCCGACCT CGTCATCGTG GTCGCCAAGA CCGACCCGGC CGCGGGCGCC
AAGGGCACCA GCCTGTTCCT GGTCGAGCGC GGCATGCCGG GCTTCGAAAA AGGCAAGCGG
CTCAAGAAGC TGGGGCTCAA GGCGCAGGAC ACCTCCGAGC TGTTCTTCAC CGACGTGCGG
CTGCCGGCCG ACGCATTGCT CGGCGACGCC GCGCAGCTGA ACCGCGGCTT CGTCTGCCTG
ATGGAGCAGC TGCCCTGGGA GCGGCTGCAG ATCGCGATCA GCGCGGTGGC CGCGTCGCAG
GCGGCCATCG ACCAGACCGT CACTTATGTG AAGGAGCGCA AGGTGTTCGG CCAGCCGGTG
GGCAGCTACC AGAACACGCG CTACACGCTC GCCGAGCTGC AGACCGAGGT GCAGGTGGCG
CAGGTGTTCG TCGACAAGTG CATCGAGCTG CTGATGGCCG AGAAGCTCGA TACCGCCACC
GCCAGCATGG CCAAGTACTG GACCACCGAC CTGCAGTGCA AGGTGATGGA CGCCTGCGTG
CAGCTGCACG GCGGCTACGG CTTCATGTGG GAATACCCGA TCACGCGCGC GTATGCCGAT
GCGCGGGTGC AGCGCATCTA TGGCGGCACG AACGAGATCA TGAAGGAGGT GATCACGCGG
GCGATGGGCC TGAGATAG
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| Protein sequence | MIERTLFSAD HEAFRDSFRR FMDKEIAPFH EAWEERGYVD RSVWSKAGEN GFLCMALPED
YGGAGADLLY SVIQFEELWA RGFTGIGFGL HSEIVAPYVL RYGTEAQKQH YLPRLASGEM
VGAIAMSEPG AGSDLQAVKT SAIRQADGSY LLNGSKTFIT NGWHADLVIV VAKTDPAAGA
KGTSLFLVER GMPGFEKGKR LKKLGLKAQD TSELFFTDVR LPADALLGDA AQLNRGFVCL
MEQLPWERLQ IAISAVAASQ AAIDQTVTYV KERKVFGQPV GSYQNTRYTL AELQTEVQVA
QVFVDKCIEL LMAEKLDTAT ASMAKYWTTD LQCKVMDACV QLHGGYGFMW EYPITRAYAD
ARVQRIYGGT NEIMKEVITR AMGLR
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