Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5263 |
Symbol | |
ID | 8336617 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 6061477 |
End bp | 6062622 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644958361 |
Product | acyl-CoA dehydrogenase domain protein |
Protein accession | YP_003115963 |
Protein GI | 256394399 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.603823 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGGAT CGCCCTGGGC GGGCGAGGAT GTGGAGGCGG TGCGCGAGCT TGCTGCGGCC TTCTTCACCA ATGAGGCGTT GCCGCGGGAG GAGGAGTTCG CGGCGCAGGG CTTCCCGAGT GCGGAGATCT GGCAGGCGGC GGGCAAGGTC GGGCTGCTGT GCGCGTCCAT TCCTGAGGAG TACGGCGGCG GGGGCGGGAC GTTCGCGCAC GAGGTCGCCA TCACCGAGGC GCAGATGCGC TCCGGTGCGG GCGCCATGGC GATCGCCGTG CACGCCGGCA TCGTCGCGCA CTACCTCAAC GCGTACGCCA CCGAGGAGCA GAAGCTGCGC TGGCTGCCGC GCATGGCCGC CGGGGAGCTG ATCGGCGCGA TCGCCATGAC CGAGCCCGGG ACCGGCTCGG ACCTGCAGAA CGTCGCCACC AAGGCGGTGC GCGAGGGCGA TGAGTACGTC ATCACCGGCG CCAAGACCTT CATCACCAAC GGCCACACCG CCGGGCTGGT CGTCATCGTC GCCAAGACCG ACACCAGCCA GGGCGCGCAC GGCGTCTCGC TGCTGGTCGC CGAGGTCGGC GACGACACTC CAGGCTTCCA GCGCGGCCGC GTTCTGAAGA AGGTCGGGCA GCACAGCACC GACACCGCCG AGCTGTTCTT CGACGGTCTG CGCGTCCCGG CCGAGAACCT GCTCGGCGGC GTGGAGGGCC AGGGCTTCGT CCAGCTCATG CTCCAGCTGC CGCAGGAACG GCTGTTGGTC GCCGCGATCG GAATGGCGAT GCTGGAGGCG GCCGTTGACT ACACCGTGGC CTACACCAAG GAGCGCGAGG CTTTCGGCAA GCCGCTGTTC AAGCTCCAGA ACACCCGCTT CGAGCTGGCC GAGTGCGCCA CGATCGCGCG CGTGGCCCGG GTCTTCTTCG ACGACTGCGT GGTCAAGCAC CTGGCCGGCG GCCTGGACGC GACGACCGCC TCGATGGCCA AGTACTGGAT CACCGACCGC CAGACCGAGG TGATCGACCG CTGTGTGCAG CTGCACGGCG GCTACGGCTA CATGCTCGAG TACCCGATCG CGCGGCTGTT CGCCGACGGC CGGGTGCAGC GCATCTACGG CGGCGCCAAC GAGATCATGA AGGAACTGAT CGCCCGCTCG CTGTAG
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Protein sequence | MSGSPWAGED VEAVRELAAA FFTNEALPRE EEFAAQGFPS AEIWQAAGKV GLLCASIPEE YGGGGGTFAH EVAITEAQMR SGAGAMAIAV HAGIVAHYLN AYATEEQKLR WLPRMAAGEL IGAIAMTEPG TGSDLQNVAT KAVREGDEYV ITGAKTFITN GHTAGLVVIV AKTDTSQGAH GVSLLVAEVG DDTPGFQRGR VLKKVGQHST DTAELFFDGL RVPAENLLGG VEGQGFVQLM LQLPQERLLV AAIGMAMLEA AVDYTVAYTK EREAFGKPLF KLQNTRFELA ECATIARVAR VFFDDCVVKH LAGGLDATTA SMAKYWITDR QTEVIDRCVQ LHGGYGYMLE YPIARLFADG RVQRIYGGAN EIMKELIARS L
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