Gene Caci_5263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5263 
Symbol 
ID8336617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6061477 
End bp6062622 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content69% 
IMG OID644958361 
Productacyl-CoA dehydrogenase domain protein 
Protein accessionYP_003115963 
Protein GI256394399 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.603823 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGAT CGCCCTGGGC GGGCGAGGAT GTGGAGGCGG TGCGCGAGCT TGCTGCGGCC 
TTCTTCACCA ATGAGGCGTT GCCGCGGGAG GAGGAGTTCG CGGCGCAGGG CTTCCCGAGT
GCGGAGATCT GGCAGGCGGC GGGCAAGGTC GGGCTGCTGT GCGCGTCCAT TCCTGAGGAG
TACGGCGGCG GGGGCGGGAC GTTCGCGCAC GAGGTCGCCA TCACCGAGGC GCAGATGCGC
TCCGGTGCGG GCGCCATGGC GATCGCCGTG CACGCCGGCA TCGTCGCGCA CTACCTCAAC
GCGTACGCCA CCGAGGAGCA GAAGCTGCGC TGGCTGCCGC GCATGGCCGC CGGGGAGCTG
ATCGGCGCGA TCGCCATGAC CGAGCCCGGG ACCGGCTCGG ACCTGCAGAA CGTCGCCACC
AAGGCGGTGC GCGAGGGCGA TGAGTACGTC ATCACCGGCG CCAAGACCTT CATCACCAAC
GGCCACACCG CCGGGCTGGT CGTCATCGTC GCCAAGACCG ACACCAGCCA GGGCGCGCAC
GGCGTCTCGC TGCTGGTCGC CGAGGTCGGC GACGACACTC CAGGCTTCCA GCGCGGCCGC
GTTCTGAAGA AGGTCGGGCA GCACAGCACC GACACCGCCG AGCTGTTCTT CGACGGTCTG
CGCGTCCCGG CCGAGAACCT GCTCGGCGGC GTGGAGGGCC AGGGCTTCGT CCAGCTCATG
CTCCAGCTGC CGCAGGAACG GCTGTTGGTC GCCGCGATCG GAATGGCGAT GCTGGAGGCG
GCCGTTGACT ACACCGTGGC CTACACCAAG GAGCGCGAGG CTTTCGGCAA GCCGCTGTTC
AAGCTCCAGA ACACCCGCTT CGAGCTGGCC GAGTGCGCCA CGATCGCGCG CGTGGCCCGG
GTCTTCTTCG ACGACTGCGT GGTCAAGCAC CTGGCCGGCG GCCTGGACGC GACGACCGCC
TCGATGGCCA AGTACTGGAT CACCGACCGC CAGACCGAGG TGATCGACCG CTGTGTGCAG
CTGCACGGCG GCTACGGCTA CATGCTCGAG TACCCGATCG CGCGGCTGTT CGCCGACGGC
CGGGTGCAGC GCATCTACGG CGGCGCCAAC GAGATCATGA AGGAACTGAT CGCCCGCTCG
CTGTAG
 
Protein sequence
MSGSPWAGED VEAVRELAAA FFTNEALPRE EEFAAQGFPS AEIWQAAGKV GLLCASIPEE 
YGGGGGTFAH EVAITEAQMR SGAGAMAIAV HAGIVAHYLN AYATEEQKLR WLPRMAAGEL
IGAIAMTEPG TGSDLQNVAT KAVREGDEYV ITGAKTFITN GHTAGLVVIV AKTDTSQGAH
GVSLLVAEVG DDTPGFQRGR VLKKVGQHST DTAELFFDGL RVPAENLLGG VEGQGFVQLM
LQLPQERLLV AAIGMAMLEA AVDYTVAYTK EREAFGKPLF KLQNTRFELA ECATIARVAR
VFFDDCVVKH LAGGLDATTA SMAKYWITDR QTEVIDRCVQ LHGGYGYMLE YPIARLFADG
RVQRIYGGAN EIMKELIARS L