| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5486 |
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| Symbol | |
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| ID | 8547899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 7527745 |
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| End bp | 7528890 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 646390159 |
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| Product | acyl-CoA dehydrogenase domain protein |
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| Protein accession | YP_003269862 |
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| Protein GI | 262198653 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.361587 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.275815 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGCA GGTTGTTTTC GGAAGAACAC GAGCTGTTTC GGCAGTCGTT CCGGCAGTTC
CTGGCCCGCG AGGTGGTTCC CCAGCAGGAG CGCTGGCGCG AGCAGGGCAT CGTCGAGCGC
GAGGTCTGGC GCAAGGCCGG CCGCCAGGGC TATCTGTGCC CGTGGCTGGC CGAGGAAGAC
GGCGGCCCCG GCGGCGACTT CCTGCATTCC ACCGTGGTGA TGGAGGAGCT GGCCCGCATC
TATGAGACCG GCTTCATGAT GTCGCTGCAC TCGGATGTCG TGGTGCCCTA CATCCACACT
TTCGGCGACG CCGAGCAGCG CAAGCGCTGG CTGCCCGGCT GCGTCTCGGG CGACCTGGTG
AGCGCGGTGG CCATGACCGA GCCCGACACC GGATCGGACC TGGCCGCGCT GCGCACCACG
GCCGTGCGCG ACGGCGACGA GTATGTGATC AACGGCGCCA AGACCTTCAT CTCCAACGGC
ATCCTGTGCG ACCTGGTGGT GCTGGCGGCC AAGACCGACC CCGACCCGGC CAACGCGCAC
AAGGGCATCA GCCTGTTCGT GGTCGAGGCC GATCGCGCCG GCTTCATCAA GGGTCGCAAG
CTGGCCAAGA TGGGCATGGC CTCGCAGGAC ACCGCCGAGC TGAGCTTCGA GGACTGCCGC
GTCCCGGCCT CCAACCGCCT CGGCGAAGAG GGCGGCGGCT TTCGCGCGCT GATGACGATG
CTGCAGCAGG AGCGGCTCAC CGTGGCCATC AGCGCCCAGG CCCAGGCCGA GCAGGTGCTG
GCCGACACCC TGGCCTACGC CGCCGAGCGC AAGGCCTTTG GCCGGCCCAT CAGCAAGTTC
CAGAACACCC AGTTCAAGCT GGCCGAGTGC GCGACCAAGG TGGAGGTCGG ACGCGCGTTC
CTCGACCGCC TGCTCGGCGA TCACGTGGCC GGCGAAGAGC TGGTCAAAGA GTGCTCCATG
GCCAAGCTGT GGCAGACCGA GATGGCCAGC GAGGTGGTCG ACACCTGCCT GCAGTTCTTC
GGCGGCTACG GCTACATGCT CGAGTACCCG GTGGCGCGCG CCTACATGGA CGCGCGCGTG
CAGCGCATCT ACGCCGGCAC GAGCGAGATC ATGAAGGTCA TCATCGCCAA GCGCATGGGC
CTGTGA
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| Protein sequence | MKRRLFSEEH ELFRQSFRQF LAREVVPQQE RWREQGIVER EVWRKAGRQG YLCPWLAEED
GGPGGDFLHS TVVMEELARI YETGFMMSLH SDVVVPYIHT FGDAEQRKRW LPGCVSGDLV
SAVAMTEPDT GSDLAALRTT AVRDGDEYVI NGAKTFISNG ILCDLVVLAA KTDPDPANAH
KGISLFVVEA DRAGFIKGRK LAKMGMASQD TAELSFEDCR VPASNRLGEE GGGFRALMTM
LQQERLTVAI SAQAQAEQVL ADTLAYAAER KAFGRPISKF QNTQFKLAEC ATKVEVGRAF
LDRLLGDHVA GEELVKECSM AKLWQTEMAS EVVDTCLQFF GGYGYMLEYP VARAYMDARV
QRIYAGTSEI MKVIIAKRMG L
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