Gene Mjls_3197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_3197 
Symbol 
ID4878910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp3349954 
End bp3351099 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content60% 
IMG OID640140499 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_001071467 
Protein GI126435776 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.107231 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTCAC CAATCTCTCC CTGGATGAAT GCCGAATTAC TCGAGCTTCG TGACCTCGCT 
GCGAAGTTCT TCTCGGCCGA ATTGGCGCCG CATGCGAACC GCTTTGCAGA CCAGCACCAC
GTCGACCGAG AACTGTGGAA CCGAGCAGGC GAGCTGGGCC TGCTCTGCAT GTCTATACCT
GAGGAATACG GCGGAGGCGG TGGCACTTTC GCGCACGAAG CGGTCGTGCT TGAAGAGCAG
GCCCGCATAG GTGACAGCTC ATGGGGCGCG GGACTGCACA GCGGAATCGT CGCCCACTAC
ATCCTGCAGT ACGCGACTGA AGAGCTGCGC GCGCAGTGGC TTCCCAAGAT GGCGTCCGGT
GAAATGATCG GGGCGATCGC CATGACAGAA CCGGGGACCG GGTCCGATCT GCAGAGCGTC
AAGACAAAAG CCCTCCTGGA CGGTGACGAG TACGTGATCA CCGGCTCCAA GACTTTCATC
ACCAACGGCC AACAGGCCGA CCTCATCATC GTTGTTGCCA AGACAGATCC GAGCCAGGGC
GCTGCGGGCA TCTCTTTGAT CGTTGTCGAG GCTGACCGGG CGGGATTCCG GCGCGGCAAG
GTTCTCGACA AAATCGGCCA GCGCGGCCAG GACACCTCCG AGTTGTTCTT CGATGAAGTG
AGAGTTCCGC GCTCGCATCT ACTGGGCCAG TCTGAGGGAC AGGGCTTCAT TCAGCTGATG
ACGCAGCTGC CACAAGAGCG ACTCATCGTC GCGGTGGGGG CTGTCGCAGC GATGGAACTT
GCCCTGGAGC AGACGCTCAA GTACACGCGT GAGCGGGAGG CGTTCGGTCG GCCTGTCTTT
GGCTTTCAGA ACACCAAGTT CACGCTGGCT GAAGCCGCGA CAGAAACGCG CATCGCACGA
GTGTTCCTCG ACTACTGCAT CGACCTGCAC CTTGCGGGTC AACTCGACGT GCAGACCGTC
GCCATGGCGA AGTGGTGGAC CACTGAGCGA GCGATGAAGG TACTCGATGA CTGTATGCAG
CTTCACGGCG GATATGGCTA CATGACCGAG TACCCCATCT CGAGGTTGTG GGTGGATCAG
CGCGTGCAAA AAATCTATGC CGGCACGAAC GAGGTGATGA AGGAAATCAT CTCGCGTTCC
CTATGA
 
Protein sequence
MSSPISPWMN AELLELRDLA AKFFSAELAP HANRFADQHH VDRELWNRAG ELGLLCMSIP 
EEYGGGGGTF AHEAVVLEEQ ARIGDSSWGA GLHSGIVAHY ILQYATEELR AQWLPKMASG
EMIGAIAMTE PGTGSDLQSV KTKALLDGDE YVITGSKTFI TNGQQADLII VVAKTDPSQG
AAGISLIVVE ADRAGFRRGK VLDKIGQRGQ DTSELFFDEV RVPRSHLLGQ SEGQGFIQLM
TQLPQERLIV AVGAVAAMEL ALEQTLKYTR EREAFGRPVF GFQNTKFTLA EAATETRIAR
VFLDYCIDLH LAGQLDVQTV AMAKWWTTER AMKVLDDCMQ LHGGYGYMTE YPISRLWVDQ
RVQKIYAGTN EVMKEIISRS L