Gene RoseRS_2850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2850 
Symbol 
ID5209819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3558354 
End bp3559499 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content61% 
IMG OID640596446 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_001277168 
Protein GI148656963 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCA CCCTGTTTGA TCCGGAACAT GACCTTTTCC GCGCCGCGTT TCGCGCATTC 
ATCGAACGCG AGATTGCGCC CTTCCACGCC GAATGGGAGC GCGTTGGCGC CGTTCCGCGC
GACCTCTGGC AGGCGGCGGG TCGCCAGGGA TTTCTCTGCA TGGATGTACC GGAGGAGTAC
GGCGGCGCCA GCGCGCGCGA TTACCGCTTC AACGTTGTTA TTGGCGAAGA GTTGTGGCGC
GCTGGCGCGA CCGGTCCGGG TTTCGTGTTG CATACCGATA TCGTCGTTCC CTACATCACG
CACTATGGCA CGCCGGATCA ACGCCGACGC TGGTTACCGC GCTGCGTCAG CGGCGAGTGC
ATCACCGCCA TTGCGATGAC CGAACCGGGC GCCGGCAGCG ATCTCGCAGC GATTCGCACA
ACAGCGCTAC GCGATGGCGA TGTGTACCTC CTGAACGGAC AGAAGACCTT CATCTCCAAC
GGCATCCTCA ACGACCTGGT GATCGTGGCG GCGAAGACCA ACCCGGAAGC CGGGCATAAG
GGGATCAGTT TGCTGGTCGT CGAGCGTGAT ATGCCGGGGT ACGAGCGCGG CAGACGCCTG
GAAAAGATTG GACTGCACGC GCAGGATACC GCTGAACTGT TCTTCCACAA TGTGCGCGTG
CCGCGTGATC ACCTCCTCGG CGAAGAAGGA CAGGGCTTTC GTTATCTGAT GGAACAATTG
CCGCGCGAAC GCCTTGCGAT TGCGGTTGGC GCCGTGGCTG CCGCAGAAGT GGCGCTCGAA
CAGACCATCC GCTACTGCCG CGAACGCGAG GCGTTCGGTC GTCCGATAGG TGCGCTCCAG
TCGGTGCGTT TCACCCTGGC GGAACTCGTG ACCGAAGTGC AGATCGGGCG TGTGTTCGTC
GATCAGTGCG TGCTGGCGTT GAACCGGGGC GAATTGACCG CCGAGACCGC AGCGATGGCA
AAATGGTGGA CGACTGAACT CCAGCAGCGT GTGGTTCATG CATGTTTGCA ACTCCATGGC
GGCTATGGCT ATATGCGCGA ATATCCGATT GCGCGCGCAT TTCTGGATGC GCGCGTCCAG
ACGATCTATG GCGGAACCAC CGAGATTATG AAGGAAATCA TCGGACGATC GCTTAAACTG
GAGTGA
 
Protein sequence
MKRTLFDPEH DLFRAAFRAF IEREIAPFHA EWERVGAVPR DLWQAAGRQG FLCMDVPEEY 
GGASARDYRF NVVIGEELWR AGATGPGFVL HTDIVVPYIT HYGTPDQRRR WLPRCVSGEC
ITAIAMTEPG AGSDLAAIRT TALRDGDVYL LNGQKTFISN GILNDLVIVA AKTNPEAGHK
GISLLVVERD MPGYERGRRL EKIGLHAQDT AELFFHNVRV PRDHLLGEEG QGFRYLMEQL
PRERLAIAVG AVAAAEVALE QTIRYCRERE AFGRPIGALQ SVRFTLAELV TEVQIGRVFV
DQCVLALNRG ELTAETAAMA KWWTTELQQR VVHACLQLHG GYGYMREYPI ARAFLDARVQ
TIYGGTTEIM KEIIGRSLKL E