| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2530 |
|---|
| Symbol | |
|---|
| ID | 4039353 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 2751791 |
|---|
| End bp | 2752927 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637977929 |
|---|
| Product | acyl-CoA dehydrogenase-like protein |
|---|
| Protein accession | YP_584676 |
|---|
| Protein GI | 94311466 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.204143 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.36456 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAAGTCG TTCGCAGTGT CTATCGTGAA GATCATGAGC AGTTCCGCAC CACCGTGCGC
CGTTTCCTGG AGCGCGAATG CGTACCGCGC CAGGAACAAT GGCTGGCCGA CGGCATCGTC
GACCGCGAAA CCTGGCTCAA GGCCGGGCGC GAAGGGCTTC TTTGCACGGC ACTGCCGACC
GAGTATGGCG GCGGCGGTGG CGACTTCGGC CACGCGGCCA TCATCGCCGA GGAAATGGCC
TATGCCGGTG TCAGCGTGTC GTTCGGGCTG CACTCGGATA TCGTGGCGCC CTACATTGCC
CGCTTGGGCA CGGAGGAACA GAAGCAGCGC TGGCTGCCCG ACATCTGCGC GGGCAAGACC
ATCCTCGCCG TTGCCATCAC CGAGCCGGGA GGCGGCTCGG ACGTCAAGGC CTGCCGGACT
ACGGCGGTGC GCGACGGCGA CGAATGGGTC ATCAATGGCA GCAAGACCTT CATCAGCAAC
GGCTTCTGCT CGGACATGGT GATGGTGGTC TGCAAGACCG ACCCCGCGGC CGGCGCCAGG
GGCGTGAGCC TGATCCTGGT CGAGACCAAC CGAGAAGGCT TCCGCCGCGG CCGCAAGCTG
CACAAGGTGG GCATGCACTC GCAGGATACC GCCGAGCTGT TCTTCGACAA CGTGCGCGTG
CCGGCGGGCA ACCTGCTGGG CGAAGTGAAC AAGGGCTTTG GCTACCTGAT GCACGACCTG
GCACAGGAGC GGTTCATCAT CGCTGTGACG GCTGCCGCCA AGATCGAACG CCTGCTGGAA
CAGACCATCG AGTATGTGAA GGACCGCAAG GCCTTTGGCG GCACCGTCTG GGACTTCCAG
AACACCAAGT TCAAGCTGGC CGATGTCAAG GCCAATGCCG TGGCGCTGCG CACCATGGTG
GACTACTACC TGGGCGAGCA CATGCGCCGC CGGCTGTCGG GCGAAGAAGC CGCCATTGCC
AAGCTGCACG CCACCGAAGT GCAGTGGAAA TGCATTGACG ACATGGTCCA GCTGCATGGC
GGCTACGGCT ACATGCTCGA GTATCCGATC GCCCGCGCCT TTGTCGACAT GCGCGTGGCG
CGCGTCTACG GCGGGTCCAA TGAAGTGATG CGCGACATCA TCACGCGCAA GATGTAA
|
|---|
| Protein sequence | MEVVRSVYRE DHEQFRTTVR RFLERECVPR QEQWLADGIV DRETWLKAGR EGLLCTALPT
EYGGGGGDFG HAAIIAEEMA YAGVSVSFGL HSDIVAPYIA RLGTEEQKQR WLPDICAGKT
ILAVAITEPG GGSDVKACRT TAVRDGDEWV INGSKTFISN GFCSDMVMVV CKTDPAAGAR
GVSLILVETN REGFRRGRKL HKVGMHSQDT AELFFDNVRV PAGNLLGEVN KGFGYLMHDL
AQERFIIAVT AAAKIERLLE QTIEYVKDRK AFGGTVWDFQ NTKFKLADVK ANAVALRTMV
DYYLGEHMRR RLSGEEAAIA KLHATEVQWK CIDDMVQLHG GYGYMLEYPI ARAFVDMRVA
RVYGGSNEVM RDIITRKM
|
|---|
| |