| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1559 |
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| Symbol | |
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| ID | 4075857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1664004 |
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| End bp | 1665167 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638006872 |
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| Product | acyl-CoA dehydrogenase-like |
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| Protein accession | YP_613554 |
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| Protein GI | 99081400 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.456319 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCAG AGCTGGATTT TCGCACATCA TCGGTGTGGA TGACCGACGA GCATAAGATG
CTCGCCGATA TGACGCAGAG CTTTATCACC AACGAATGGG CGCCCAAATT CGAGCGCTGG
CGCAAACAGG GCGAGATGGA TCGCTCGACA TGGGCGCAGG CCGGAGAACT GGGCCTGCTC
TGCCCCTCCA TCCCCGAGGA ATACGGCGGT GCGGGCGGCG ATTTTGGCCA TGAGGCGGCG
ATCCTGATTG AGGCCAGCCG CGCCAATCTC GCCAGCTGGG GCCACGGGAT CCACTCGGGC
ATCGTGGCGC ATTACATCCT CTCCTACGGT ACCGAAGAGC AAAAACAGCG CTGGCTGCCC
AAGATGGTGT CCGGCGAGTT GGTCGGCGCG CTGGCGATGA CAGAGCCGTG TACCGGATCT
GACGTGCAGG CGATCAAAAC CAAGGCCATT CGTGATGGCA ATGTTTATCG GCTCTCGGGC
CAGAAAACCT TTATTACCAA TGGGCAACAC GCCAACCTGA TCCTTGTTGC GGCCAAGACC
GACCCGTCCC AGGGCGCAAA AGGCATCTCG CTTGTGGCGC TTGAAACCGA GGGCGCTGAA
GGGTTCAGCC GGGGGCGTAA CCTCGAGAAG GTCGGCCTGC ACGCGGCGGA TACCTCGGAG
CTCTTTTTCG ACAATATCGC TGTGCCACCG GAGAACATTC TGGGCGCAAC GGAGGCGCAA
GGCTTTTACC AGATGATGCA GCAATTGCCG CAGGAACGGC TGATCATCGC CTGCGGCGCG
GTTGGCGCGA TGCAGGGCGC GGTCGAGCGC ACCATCGCAT ATTGTAAAGA GCGCGAAGCC
TTTGGCGGGC CGCTCACGCA GTTCCAGAAT ACCCGTTTCA AACTCGCCGA ATGCCTGACC
AAGAGTAAAG TCGCCCGCGC CTTCCTTGAT GACTGCATGG TCCAGCACCT ACGTGGAGAG
TTGACCGTCG AAAAGGCGGC GATGGCTAAA TACTGGATCA CCGACGCGCA AGGCGCTGTG
CTTGATGAGT GCCTGCAATT GCACGGAGGA TATGGGTTCA TGCAAGAATA CGCCGTGGCA
GAAATGTGGA CCGATGCCCG TGTGCAGCGC ATTTACGGCG GCACCAATGA GATTATGAAA
GAGCTGATTG CGAGGTCTCT ATGA
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| Protein sequence | MSAELDFRTS SVWMTDEHKM LADMTQSFIT NEWAPKFERW RKQGEMDRST WAQAGELGLL
CPSIPEEYGG AGGDFGHEAA ILIEASRANL ASWGHGIHSG IVAHYILSYG TEEQKQRWLP
KMVSGELVGA LAMTEPCTGS DVQAIKTKAI RDGNVYRLSG QKTFITNGQH ANLILVAAKT
DPSQGAKGIS LVALETEGAE GFSRGRNLEK VGLHAADTSE LFFDNIAVPP ENILGATEAQ
GFYQMMQQLP QERLIIACGA VGAMQGAVER TIAYCKEREA FGGPLTQFQN TRFKLAECLT
KSKVARAFLD DCMVQHLRGE LTVEKAAMAK YWITDAQGAV LDECLQLHGG YGFMQEYAVA
EMWTDARVQR IYGGTNEIMK ELIARSL
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