More than 300 homologs were found in PanDaTox collection
for query gene Swit_0397 on replicon NC_009511
Organism: Sphingomonas wittichii RW1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009511  Swit_0397  phosphotransferase system, phosphocarrier protein HPr  100 
 
 
90 aa  176  1e-43  Sphingomonas wittichii RW1  Bacteria  normal  0.081426  normal  0.0975704 
 
 
-
 
NC_008048  Sala_2052  HPrNtr  60.87 
 
 
92 aa  105  3e-22  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.67872  normal  0.126322 
 
 
-
 
NC_008254  Meso_3575  HPr family phosphocarrier protein  60 
 
 
101 aa  99.4  1e-20  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_0048  phosphocarrier protein HPr  56.67 
 
 
91 aa  99  2e-20  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_3248  phosphotransferase system, phosphocarrier protein HPr  60 
 
 
97 aa  95.9  1e-19  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0371  phosphotransferase system, HPr  57.95 
 
 
111 aa  96.3  1e-19  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0255941 
 
 
-
 
NC_011004  Rpal_0357  Phosphotransferase system, phosphocarrier protein HPr  55.68 
 
 
110 aa  95.1  3e-19  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_0467  HPrNtr  53.41 
 
 
108 aa  94  7e-19  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.319274  normal  0.40713 
 
 
-
 
NC_009667  Oant_0824  phosphotransferase system, phosphocarrier protein HPr  55.06 
 
 
104 aa  93.6  7e-19  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_0376  Phosphotransferase system, phosphocarrier protein HPr  53.49 
 
 
89 aa  93.2  9e-19  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.293876 
 
 
-
 
NC_004310  BR2095  phosphocarrier protein HPr  55.29 
 
 
104 aa  91.7  3e-18  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009505  BOV_2014  phosphocarrier protein HPr  55.29 
 
 
104 aa  91.7  3e-18  Brucella ovis ATCC 25840  Bacteria  normal  0.205162  n/a   
 
 
-
 
NC_009485  BBta_7372  PTS system phosphocarrier protein HPr  58.82 
 
 
109 aa  91.3  4e-18  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.912866  normal 
 
 
-
 
NC_009484  Acry_0444  phosphotransferase system, phosphocarrier protein HPr  55.68 
 
 
99 aa  90.9  5e-18  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_0207  phosphotransferase system  53.49 
 
 
89 aa  90.1  8e-18  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.592546 
 
 
-
 
NC_007925  RPC_0593  HPrNtr  57.14 
 
 
112 aa  89  2e-17  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.040328  normal 
 
 
-
 
NC_010338  Caul_4626  phosphotransferase system, phosphocarrier protein HPr  56.47 
 
 
92 aa  88.6  3e-17  Caulobacter sp. K31  Bacteria  normal  0.563542  normal 
 
 
-
 
NC_011901  Tgr7_0720  phosphoryl transfer system, HPr  54.76 
 
 
89 aa  88.2  3e-17  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_1190  phosphotransferase system, phosphocarrier protein HPr  51.81 
 
 
88 aa  86.7  9e-17  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_0468  Phosphotransferase system, phosphocarrier protein HPr  50.59 
 
 
89 aa  84.7  4e-16  Thauera sp. MZ1T  Bacteria  normal  0.278707  n/a   
 
 
-
 
NC_013422  Hneap_0744  Phosphotransferase system, phosphocarrier protein HPr  52.44 
 
 
89 aa  84.3  5e-16  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_4292  Phosphotransferase system, phosphocarrier protein HPr  58.89 
 
 
91 aa  83.6  9e-16  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_0251  phosphocarrier, HPr family  48.24 
 
 
111 aa  82.8  0.000000000000001  Methylocella silvestris BL2  Bacteria  n/a    normal  0.179436 
 
 
-
 
NC_009720  Xaut_2849  phosphotransferase system, phosphocarrier protein HPr  54.12 
 
 
126 aa  83.2  0.000000000000001  Xanthobacter autotrophicus Py2  Bacteria  normal  0.531241  normal  0.30984 
 
 
-
 
NC_007760  Adeh_0152  HPrNtr  43.82 
 
 
90 aa  82  0.000000000000002  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.28673  n/a   
 
 
-
 
NC_011145  AnaeK_0159  phosphotransferase system, phosphocarrier protein HPr  43.82 
 
 
90 aa  82  0.000000000000003  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_0439  HPrNtr  55.29 
 
 
113 aa  82  0.000000000000003  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_0170  phosphocarrier, HPr family  43.82 
 
 
90 aa  82  0.000000000000003  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_0077  HPr family phosphocarrier protein  47.78 
 
 
91 aa  81.3  0.000000000000004  Maricaulis maris MCS10  Bacteria  normal  normal  0.984139 
 
 
-
 
NC_009675  Anae109_0157  phosphotransferase system, phosphocarrier protein HPr  46.07 
 
 
90 aa  80.9  0.000000000000005  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.160349 
 
 
-
 
NC_011369  Rleg2_3965  Phosphotransferase system, phosphocarrier protein HPr  57.78 
 
 
91 aa  80.9  0.000000000000006  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_0147  HPrNtr  41.86 
 
 
89 aa  80.9  0.000000000000006  Methylobacillus flagellatus KT  Bacteria  normal  normal  0.377653 
 
 
-
 
NC_009049  Rsph17029_0319  phosphotransferase system, phosphocarrier protein HPr  51.76 
 
 
89 aa  80.5  0.000000000000008  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.734437  normal  0.80364 
 
 
-
 
NC_007614  Nmul_A0219  HPrNtr  44.05 
 
 
89 aa  80.5  0.000000000000008  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A2113  phosphocarrier protein NPr  47.25 
 
 
92 aa  80.1  0.000000000000009  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_2737  phosphotransferase system, phosphocarrier protein HPr  48.24 
 
 
124 aa  79.7  0.00000000000001  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.0535175 
 
 
-
 
NC_007643  Rru_A3446  HPrNtr  51.76 
 
 
112 aa  79.7  0.00000000000001  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1882  phosphocarrier protein HPr  45.98 
 
 
88 aa  79  0.00000000000002  Geobacter sulfurreducens PCA  Bacteria  normal  0.38742  n/a   
 
 
-
 
NC_011894  Mnod_5437  phosphocarrier, HPr family  47.06 
 
 
106 aa  79.3  0.00000000000002  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0438288  n/a   
 
 
-
 
NC_007404  Tbd_2413  HPrNtr  45.35 
 
 
89 aa  79  0.00000000000002  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.981961  normal 
 
 
-
 
NC_009428  Rsph17025_2560  phosphotransferase system, phosphocarrier protein HPr  50.59 
 
 
89 aa  79.3  0.00000000000002  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_0115  phosphotransferase system, phosphocarrier protein HPr  57.14 
 
 
101 aa  78.6  0.00000000000003  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.158465  normal 
 
 
-
 
NC_010511  M446_0229  phosphotransferase system, phosphocarrier protein HPr  48.24 
 
 
106 aa  78.6  0.00000000000003  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0207173 
 
 
-
 
NC_011365  Gdia_1900  Phosphotransferase system, phosphocarrier protein HPr  49.4 
 
 
107 aa  77.8  0.00000000000004  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal  0.0610024 
 
 
-
 
NC_010172  Mext_1234  HPr family phosphocarrier protein  52.94 
 
 
107 aa  77.8  0.00000000000005  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_010655  Amuc_1757  Phosphotransferase system, phosphocarrier protein HPr  47.06 
 
 
88 aa  77.8  0.00000000000005  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_1396  phosphocarrier, HPr family  52.94 
 
 
107 aa  77.8  0.00000000000005  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.135473 
 
 
-
 
NC_010505  Mrad2831_2387  phosphotransferase system, phosphocarrier protein HPr  49.41 
 
 
105 aa  77.8  0.00000000000005  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.357738  hitchhiker  0.00387358 
 
 
-
 
NC_006368  lpp0540  hypothetical protein  44.19 
 
 
89 aa  77.4  0.00000000000006  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl0516  hypothetical protein  44.19 
 
 
89 aa  77.4  0.00000000000006  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_007498  Pcar_1930  phosphocarrier protein HPr  47.06 
 
 
95 aa  77.4  0.00000000000006  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.0000294443  n/a   
 
 
-
 
NC_008789  Hhal_2132  phosphotransferase system, phosphocarrier protein HPr  50 
 
 
91 aa  77.4  0.00000000000006  Halorhodospira halophila SL1  Bacteria  normal  0.595795  n/a   
 
 
-
 
NC_008687  Pden_2848  phosphotransferase system, phosphocarrier protein HPr  50 
 
 
96 aa  77  0.00000000000009  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_0541  HPrNtr  47.06 
 
 
93 aa  76.6  0.0000000000001  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_007484  Noc_2799  phosphoryl transfer system, HPr  50.56 
 
 
89 aa  75.5  0.0000000000002  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_007493  RSP_1686  putative phosphocarrier HPr protein  51.76 
 
 
89 aa  75.1  0.0000000000003  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.842664  n/a   
 
 
-
 
NC_012918  GM21_3385  Phosphotransferase system, phosphocarrier protein HPr  48.81 
 
 
88 aa  75.1  0.0000000000003  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_010681  Bphyt_0530  Phosphotransferase system, phosphocarrier protein HPr  43.02 
 
 
89 aa  74.7  0.0000000000004  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0602783  normal 
 
 
-
 
NC_013440  Hoch_2760  Phosphotransferase system, phosphocarrier protein HPr  48.28 
 
 
93 aa  74.7  0.0000000000004  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.0566866 
 
 
-
 
NC_010622  Bphy_0261  phosphotransferase system, phosphocarrier protein HPr  44.19 
 
 
89 aa  74.7  0.0000000000004  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009783  VIBHAR_03668  hypothetical protein  45.45 
 
 
91 aa  74.3  0.0000000000005  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007951  Bxe_A4185  HPrNtr  43.02 
 
 
89 aa  73.9  0.0000000000006  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007406  Nwi_0344  phosphoryl transfer system, HPr  50 
 
 
109 aa  73.9  0.0000000000007  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal  0.155438 
 
 
-
 
NC_008390  Bamb_2916  HPr family phosphocarrier protein  45.35 
 
 
89 aa  73.6  0.0000000000008  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_3621  phosphotransferase system, phosphocarrier protein HPr  42.22 
 
 
91 aa  73.6  0.0000000000009  Shewanella pealeana ATCC 700345  Bacteria  normal  0.0126154  n/a   
 
 
-
 
NC_007510  Bcep18194_A6190  HPrNtr  44.19 
 
 
89 aa  73.6  0.0000000000009  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_013517  Sterm_4094  Phosphotransferase system, phosphocarrier protein HPr  49.4 
 
 
89 aa  73.2  0.000000000001  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.0707453  n/a   
 
 
-
 
NC_009080  BMA10247_2833  phosphocarrier protein HPr  44.19 
 
 
89 aa  72.8  0.000000000001  Burkholderia mallei NCTC 10247  Bacteria  normal  0.858125  n/a   
 
 
-
 
NC_008836  BMA10229_A1406  phosphocarrier protein HPr  44.19 
 
 
89 aa  72.8  0.000000000001  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA3212  phosphocarrier protein HPr  44.19 
 
 
89 aa  72.8  0.000000000001  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0657  phosphocarrier protein HPr  44.19 
 
 
89 aa  72.8  0.000000000001  Burkholderia pseudomallei 1710b  Bacteria  normal  0.300797  n/a   
 
 
-
 
NC_009076  BURPS1106A_0492  phosphocarrier protein HPr  44.19 
 
 
89 aa  72.8  0.000000000001  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_2436  phosphotransferase system, HPr  50 
 
 
89 aa  73.2  0.000000000001  Ruegeria sp. TM1040  Bacteria  normal  0.119206  normal  0.979343 
 
 
-
 
NC_009074  BURPS668_0473  phosphocarrier protein HPr  44.19 
 
 
89 aa  72.8  0.000000000001  Burkholderia pseudomallei 668  Bacteria  normal  0.316514  n/a   
 
 
-
 
NC_010084  Bmul_0442  phosphotransferase system, phosphocarrier protein HPr  43.02 
 
 
89 aa  72.8  0.000000000001  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.293204  normal 
 
 
-
 
NC_008785  BMASAVP1_A0186  phosphocarrier protein HPr  44.19 
 
 
89 aa  72.8  0.000000000001  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_2420  phosphotransferase system, phosphocarrier protein HPr  43.37 
 
 
89 aa  72.4  0.000000000002  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.11815 
 
 
-
 
NC_007517  Gmet_1288  HPrNtr  47.06 
 
 
88 aa  72.4  0.000000000002  Geobacter metallireducens GS-15  Bacteria  normal  0.12196  hitchhiker  0.00000200864 
 
 
-
 
NC_010551  BamMC406_2778  phosphotransferase system, phosphocarrier protein HPr  44.19 
 
 
89 aa  72.8  0.000000000002  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_0245  hypothetical protein  41.86 
 
 
89 aa  72  0.000000000002  Cupriavidus metallidurans CH34  Bacteria  normal  0.519653  normal 
 
 
-
 
NC_008060  Bcen_2247  phosphotransferase system, HPr  44.19 
 
 
89 aa  72.8  0.000000000002  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_2872  phosphotransferase system, phosphocarrier protein HPr  44.19 
 
 
89 aa  72.8  0.000000000002  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.424776  normal  0.410297 
 
 
-
 
NC_008542  Bcen2424_2861  HPr family phosphocarrier protein  44.19 
 
 
89 aa  72.8  0.000000000002  Burkholderia cenocepacia HI2424  Bacteria  normal  0.324976  n/a   
 
 
-
 
NC_007794  Saro_2902  HPrNtr  47.78 
 
 
102 aa  71.6  0.000000000003  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.193803  n/a   
 
 
-
 
NC_009379  Pnuc_1952  phosphotransferase system, phosphocarrier protein HPr  42.17 
 
 
89 aa  72  0.000000000003  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_0874  Phosphotransferase system, phosphocarrier protein HPr  47.62 
 
 
88 aa  71.6  0.000000000003  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I0412  phosphocarrier protein HPr  43.02 
 
 
89 aa  71.2  0.000000000004  Burkholderia thailandensis E264  Bacteria  normal  0.889761  n/a   
 
 
-
 
NC_010725  Mpop_1175  Phosphotransferase system, phosphocarrier protein HPr  52.94 
 
 
107 aa  70.9  0.000000000006  Methylobacterium populi BJ001  Bacteria  normal  normal  0.717177 
 
 
-
 
NC_011206  Lferr_2626  Phosphotransferase system, phosphocarrier protein HPr  44.83 
 
 
90 aa  70.5  0.000000000007  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.325956  normal 
 
 
-
 
NC_007347  Reut_A0296  phosphoryl transfer system, HPr  41.86 
 
 
89 aa  70.5  0.000000000007  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_0203  Phosphotransferase system, phosphocarrier protein HPr  39.53 
 
 
89 aa  70.5  0.000000000007  Ralstonia pickettii 12J  Bacteria  normal  0.405136  normal  0.268008 
 
 
-
 
NC_011761  AFE_3019  phosphocarrier protein HPr  44.83 
 
 
90 aa  70.5  0.000000000007  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.330484  n/a   
 
 
-
 
NC_008340  Mlg_2234  HPr family phosphocarrier protein  46.34 
 
 
119 aa  70.5  0.000000000008  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_013456  VEA_002399  phosphocarrier protein nitrogen regulation associated  44.32 
 
 
91 aa  70.5  0.000000000008  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_0980  phosphotransferase system, phosphocarrier protein HPr  47.13 
 
 
88 aa  70.5  0.000000000008  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_0222  Phosphotransferase system, phosphocarrier protein HPr  39.53 
 
 
89 aa  70.1  0.000000000009  Ralstonia pickettii 12D  Bacteria  normal  hitchhiker  0.000064621 
 
 
-
 
NC_009439  Pmen_0866  phosphotransferase system, phosphocarrier protein HPr  48.24 
 
 
90 aa  69.7  0.00000000001  Pseudomonas mendocina ymp  Bacteria  normal  0.176719  normal  0.959659 
 
 
-
 
NC_010531  Pnec_1657  Phosphotransferase system, phosphocarrier protein HPr  40.96 
 
 
89 aa  69.7  0.00000000001  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal  0.769211 
 
 
-
 
NC_012791  Vapar_4897  Phosphotransferase system, phosphocarrier protein HPr  40.7 
 
 
89 aa  69.3  0.00000000002  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0296  phosphotransferase system, phosphocarrier protein HPr  40.7 
 
 
89 aa  68.9  0.00000000002  Acidovorax sp. JS42  Bacteria  normal  hitchhiker  0.000166635 
 
 
-
 
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