Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0397 |
Symbol | |
ID | 5199597 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 423171 |
End bp | 423443 |
Gene Length | 273 bp |
Protein Length | 90 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640579935 |
Product | phosphotransferase system, phosphocarrier protein HPr |
Protein accession | YP_001260903 |
Protein GI | 148553321 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1925] Phosphotransferase system, HPr-related proteins |
TIGRFAM ID | [TIGR01003] Phosphotransferase System HPr (HPr) Family |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.081426 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0975704 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCAAT TCCGGCGCGA AGTGCAGATC ACGAACATCA GGGGGCTTCA CGCCCGGGCC AGCGCCAAAT TCGTCACCCT CGCCAGCGCG CACAGCGCCG AGGTGGAGGT CGAGAAGGAC GGGTCGAAGG TCGCCGGCAC CTCGATCATG GGGCTGATGA TGCTCGGCGC CGCCAAGGGC GACAGCGTCG TCATCTCCGC CACCGGCGAC GGCGCCGAAA AGGCGCTCGC CGCGCTGATC GAACTGGTCG AAGGCAAGTT CGGCGAGGAG TGA
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Protein sequence | MTQFRREVQI TNIRGLHARA SAKFVTLASA HSAEVEVEKD GSKVAGTSIM GLMMLGAAKG DSVVISATGD GAEKALAALI ELVEGKFGEE
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