| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1757 |
|---|
| Symbol | |
|---|
| ID | 6275130 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | - |
|---|
| Start bp | 2140375 |
|---|
| End bp | 2140641 |
|---|
| Gene Length | 267 bp |
|---|
| Protein Length | 88 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642613820 |
|---|
| Product | Phosphotransferase system, phosphocarrier protein HPr |
|---|
| Protein accession | YP_001878356 |
|---|
| Protein GI | 187736244 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1925] Phosphotransferase system, HPr-related proteins |
|---|
| TIGRFAM ID | [TIGR01003] Phosphotransferase System HPr (HPr) Family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 65 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCACCA AGGAACTCAC CATCATCAAC AAACTCGGCA TTCACGCACG CCCGGCTGCT
CAATTCGTCA AACTGGCCAG CAAATTTGAT GCAGACATTG TCGTGGAGAA GGATGGCGAG
GAAGTTGACG GCAAGAGCAT TCTGGGTTTG ATGATGCTGG CGGTAGGCCA CGGCTCCAAG
ATCACCATCA CGGCGGAAGG GAAGGACGAA CAGGAAGCGC TGAACGCGCT GGAAGACCTG
ATTTACCGCA AGTTTGAAGA AGATTGA
|
|---|
| Protein sequence | MVTKELTIIN KLGIHARPAA QFVKLASKFD ADIVVEKDGE EVDGKSILGL MMLAVGHGSK
ITITAEGKDE QEALNALEDL IYRKFEED
|
|---|
| |