| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3248 |
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| Symbol | |
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| ID | 5324127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3430211 |
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| End bp | 3430504 |
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| Gene Length | 294 bp |
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| Protein Length | 97 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640792196 |
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| Product | phosphotransferase system, phosphocarrier protein HPr |
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| Protein accession | YP_001328907 |
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| Protein GI | 150398440 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1925] Phosphotransferase system, HPr-related proteins |
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| TIGRFAM ID | [TIGR01003] Phosphotransferase System HPr (HPr) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGGACC ACCTTTCGGA CGCGGCGCTC ACGCGTGAAC TGCTTATCGT CAACAAGCGC
GGACTGCATG CGCGTGCCTC GGCGAAATTC GTTCAAACCG TCGAAGCTTA TGATGCGGAG
ATCACCGTGT CGAAAGACGG CATGACCGTC GGCGGGACCT CGATCATGGG GCTGATGATG
CTGGCGGCCA GCACCGGCTG CACGGTTTTT GTGACCGCCA GCGGCGCTCA GGCGGAAGAG
GCGCTCAACG CGCTCGACGC GCTGGTCCGC GACAAGTTTG GCGAGGACAT ATGA
|
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| Protein sequence | MMDHLSDAAL TRELLIVNKR GLHARASAKF VQTVEAYDAE ITVSKDGMTV GGTSIMGLMM
LAASTGCTVF VTASGAQAEE ALNALDALVR DKFGEDI
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