| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1952 |
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| Symbol | |
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| ID | 5052186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 2025970 |
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| End bp | 2026239 |
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| Gene Length | 270 bp |
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| Protein Length | 89 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640472127 |
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| Product | phosphotransferase system, phosphocarrier protein HPr |
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| Protein accession | YP_001156728 |
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| Protein GI | 145590131 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1925] Phosphotransferase system, HPr-related proteins |
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| TIGRFAM ID | [TIGR01003] Phosphotransferase System HPr (HPr) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCAGTTG CTGAAATTGA AATTATTAAT AAATTAGGGC TTCATGCAAG AGCCTCGGCG
AAGTTATCTC AACTGGCAGC CCAATTTCCT TGTGAAATAT TGTTGTCACG TAATGGTCGT
CAAATCAATG CCAAGAGCAT TATGGGCGTC ATGATGCTAG CCGCAGGTAT TGGAAGCACG
GTAACCCTTG AGACTGTCGG CGAGAAGGCA GATGAGGCGA TGCAAGCTCT CACAGCATTA
ATTAATGACC GCTTCGGAGA GGGCGAATAA
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| Protein sequence | MPVAEIEIIN KLGLHARASA KLSQLAAQFP CEILLSRNGR QINAKSIMGV MMLAAGIGST
VTLETVGEKA DEAMQALTAL INDRFGEGE
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