Gene Rpic12D_0222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0222 
Symbol 
ID8017845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp236274 
End bp236543 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content59% 
IMG OID644829002 
ProductPhosphotransferase system, phosphocarrier protein HPr 
Protein accessionYP_002980202 
Protein GI241661842 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1925] Phosphotransferase system, HPr-related proteins 
TIGRFAM ID[TIGR01003] Phosphotransferase System HPr (HPr) Family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000064621 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGCAGA GGGATATCAC CATCATCAAT AAGCTGGGGC TGCACGCTCG CGCTTCCGCC 
AAACTTACCC AGCTCGCCAG CAAGTTCGAC AGCCAGATCA AGATGTCGCG CAACGGCCGT
CAGGTCGATG CCAAGAGCAT CATGGGCGTG ATGATGCTGG CGGCAGGCAT TGGCTCCACA
GTCACGCTGG AGATCGAAGG CCCTGACGAG CACGACGCCA TGGATGGCTT GGTCGCGCTC
ATCAACGATC GCTTCGGCGA AGGCGAATAA
 
Protein sequence
MLQRDITIIN KLGLHARASA KLTQLASKFD SQIKMSRNGR QVDAKSIMGV MMLAAGIGST 
VTLEIEGPDE HDAMDGLVAL INDRFGEGE