Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0222 |
Symbol | |
ID | 8017845 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 236274 |
End bp | 236543 |
Gene Length | 270 bp |
Protein Length | 89 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644829002 |
Product | Phosphotransferase system, phosphocarrier protein HPr |
Protein accession | YP_002980202 |
Protein GI | 241661842 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1925] Phosphotransferase system, HPr-related proteins |
TIGRFAM ID | [TIGR01003] Phosphotransferase System HPr (HPr) Family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.000064621 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTGCAGA GGGATATCAC CATCATCAAT AAGCTGGGGC TGCACGCTCG CGCTTCCGCC AAACTTACCC AGCTCGCCAG CAAGTTCGAC AGCCAGATCA AGATGTCGCG CAACGGCCGT CAGGTCGATG CCAAGAGCAT CATGGGCGTG ATGATGCTGG CGGCAGGCAT TGGCTCCACA GTCACGCTGG AGATCGAAGG CCCTGACGAG CACGACGCCA TGGATGGCTT GGTCGCGCTC ATCAACGATC GCTTCGGCGA AGGCGAATAA
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Protein sequence | MLQRDITIIN KLGLHARASA KLTQLASKFD SQIKMSRNGR QVDAKSIMGV MMLAAGIGST VTLEIEGPDE HDAMDGLVAL INDRFGEGE
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