Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2113 |
Symbol | ptsO |
ID | 5135573 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 2268184 |
End bp | 2268462 |
Gene Length | 279 bp |
Protein Length | 92 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640533569 |
Product | phosphocarrier protein NPr |
Protein accession | YP_001218029 |
Protein GI | 147674555 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1925] Phosphotransferase system, HPr-related proteins |
TIGRFAM ID | [TIGR01003] Phosphotransferase System HPr (HPr) Family |
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Plasmid Coverage information |
Num covering plasmid clones | 54 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGCAAC TAAGCCAAAC CGTGCTGATC CAAAACCGCC TTGGCCTGCA TGCGCGCGCA GCGGTTAAAC TGGTGCAACT GGCTCAATCC TTTGATGCAG TATTGACTGT ACAGAGCCAA GATGGCCGTG AAGCAACCGC CGACAGTGTG ATGGGGTTAC TGATGCTGGA ATCGGCACAA GGGCAAAACG TGGTGATCTC CGCCGAAGGC TCGCAAGCCG AACAAGCTCT ACAAGCGGTT TGTCAGCTTA TCGAACAAAA ATTTGATGAA GATGAGTAA
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Protein sequence | MPQLSQTVLI QNRLGLHARA AVKLVQLAQS FDAVLTVQSQ DGREATADSV MGLLMLESAQ GQNVVISAEG SQAEQALQAV CQLIEQKFDE DE
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