Gene Nham_0439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0439 
Symbol 
ID4030074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp484410 
End bp484751 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content65% 
IMG OID637968967 
ProductHPrNtr 
Protein accessionYP_575789 
Protein GI92116060 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1925] Phosphotransferase system, HPr-related proteins 
TIGRFAM ID[TIGR01003] Phosphotransferase System HPr (HPr) Family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGGGA AGCCGGACGA CGCAACCTCC CCGAGCGCTG CTCCGGCGGT GAGCGGAGCA 
TTTCCCGCAG GCGCGGTCTC CCGCGAAATT TCGATCATCA ACAAGCGTGG CCTCCATGCC
CGTGCGTCCG CGAAATTCGT GCAGATGGTC GAGCGCTTCA ACGCCGAGGT CAGCGTGACG
CGCAACGGCG AGACGGTCGG CGGCAATTCG ATCATGGGAT TGATGATGCT GTCGGCGGGG
ATCGGAACAA CGATCACCGT GTCCGCAACC GGCCCCGAGG CCAAGGCGGC GGTCGCGGCG
ATCGCCGAAC TCGTCGGCGA CCGATTCAAC GAGGAAGAGT AG
 
Protein sequence
MTGKPDDATS PSAAPAVSGA FPAGAVSREI SIINKRGLHA RASAKFVQMV ERFNAEVSVT 
RNGETVGGNS IMGLMMLSAG IGTTITVSAT GPEAKAAVAA IAELVGDRFN EEE