Gene BamMC406_2778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2778 
Symbol 
ID6176168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp3078314 
End bp3078583 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content59% 
IMG OID641682555 
Productphosphotransferase system, phosphocarrier protein HPr 
Protein accessionYP_001809471 
Protein GI172061819 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1925] Phosphotransferase system, HPr-related proteins 
TIGRFAM ID[TIGR01003] Phosphotransferase System HPr (HPr) Family 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCAAC AAGAAACCAC CATCGTCAAC AAATTGGGGC TCCATGCACG CGCATCGGCC 
AAGCTTACGC AACTGGCCGG CAACTTCCAG TCGGAAGTCT GGATGACGCG CAACGGGCGC
AAGATCAACG CGAAAAGCAT CATGGGCGTG ATGATGCTCG CGGCGGGCAT CGGCAGCACG
GTGACGATCG AGACCGAAGG TCCCGACGAG CGCGAAGCGA TGGATGCGCT GCTCAAGCTG
ATCGCGGACA AATTCGGCGA AGGTCAGTGA
 
Protein sequence
MLQQETTIVN KLGLHARASA KLTQLAGNFQ SEVWMTRNGR KINAKSIMGV MMLAAGIGST 
VTIETEGPDE REAMDALLKL IADKFGEGQ