Gene Pden_2848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2848 
Symbol 
ID4581435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp14837 
End bp15127 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content65% 
IMG OID639770175 
Productphosphotransferase system, phosphocarrier protein HPr 
Protein accessionYP_916628 
Protein GI119385573 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1925] Phosphotransferase system, HPr-related proteins 
TIGRFAM ID[TIGR01003] Phosphotransferase System HPr (HPr) Family 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGACA TGACCAACGG GGCCGTCACC CGCGAACTGG CGATCATCAA CGAAAAGGGC 
CTGCATGCGC GGGCCAGCGC GAAATTCGTC GAGACCGTCG AGCGGTTCGA TGCGCAGGCG
ACCGTCGAAA AGGACGGCAT CAGCGTCTCG GGCGATTCGA TCATGGGCCT GCTGATGCTG
GCCGCGCCGC GCGGCAGCGC CATTCGCGTC ACCGTCAGGG GCGCGCAGGC GCGGGAACTG
GCCGATGCGC TGACCGCGCT TGTCGAGGAT TACTTCGGCG AAGGCATGTA A
 
Protein sequence
MNDMTNGAVT RELAIINEKG LHARASAKFV ETVERFDAQA TVEKDGISVS GDSIMGLLML 
AAPRGSAIRV TVRGAQAREL ADALTALVED YFGEGM