More than 300 homologs were found in PanDaTox collection
for query gene Rsph17029_3758 on replicon NC_009050
Organism: Rhodobacter sphaeroides ATCC 17029



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009050  Rsph17029_3758  binding-protein-dependent transport systems inner membrane component  100 
 
 
297 aa  571  1.0000000000000001e-162  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_007494  RSP_3031  ABC peptide/opine transporter, inner membrane subunit  99.33 
 
 
297 aa  568  1e-161  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_2625  binding-protein-dependent transport systems inner membrane component  41.37 
 
 
288 aa  218  1e-55  Chelativorans sp. BNC1  Bacteria  normal  0.2377  n/a   
 
 
-
 
NC_013739  Cwoe_2947  binding-protein-dependent transport systems inner membrane component  44.14 
 
 
300 aa  211  1e-53  Conexibacter woesei DSM 14684  Bacteria  normal  0.456335  normal  0.0430362 
 
 
-
 
NC_013411  GYMC61_1354  binding-protein-dependent transport systems inner membrane component  37.2 
 
 
299 aa  203  3e-51  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009253  Dred_2452  binding-protein-dependent transport systems inner membrane component  39.03 
 
 
296 aa  201  9.999999999999999e-51  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0368392  n/a   
 
 
-
 
NC_008009  Acid345_1395  ABC peptide transporter, inner membrane subunit  38.15 
 
 
288 aa  201  9.999999999999999e-51  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.064701  decreased coverage  0.00784209 
 
 
-
 
NC_007947  Mfla_1485  binding-protein-dependent transport systems inner membrane component  38.69 
 
 
274 aa  201  1.9999999999999998e-50  Methylobacillus flagellatus KT  Bacteria  normal  0.0146821  normal  0.125484 
 
 
-
 
NC_008254  Meso_2636  binding-protein-dependent transport systems inner membrane component  40.61 
 
 
283 aa  200  1.9999999999999998e-50  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2032  binding-protein-dependent transport systems inner membrane component  41.87 
 
 
285 aa  199  3e-50  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_1443  binding-protein-dependent transport systems inner membrane component  43.72 
 
 
277 aa  196  3e-49  Meiothermus ruber DSM 1279  Bacteria  normal  0.486684  normal 
 
 
-
 
NC_013203  Apar_0958  binding-protein-dependent transport systems inner membrane component  38.11 
 
 
318 aa  196  4.0000000000000005e-49  Atopobium parvulum DSM 20469  Bacteria  normal  0.643704  normal 
 
 
-
 
NC_005945  BAS4391  oligopeptide ABC transporter oligopeptide-binding protein  38.24 
 
 
299 aa  196  5.000000000000001e-49  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_4232  oligopeptide transport system, permease  38.24 
 
 
299 aa  196  5.000000000000001e-49  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4244  oligopeptide ABC transporter, permease  38.24 
 
 
299 aa  196  5.000000000000001e-49  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_4609  oligopeptide ABC transporter, oligopeptide-binding protein  38.24 
 
 
299 aa  196  5.000000000000001e-49  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_007530  GBAA_4731  oligopeptide ABC transporter oligopeptide-binding protein  38.24 
 
 
299 aa  196  5.000000000000001e-49  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_008686  Pden_1250  binding-protein-dependent transport systems inner membrane component  42.86 
 
 
301 aa  195  6e-49  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.70134 
 
 
-
 
NC_013739  Cwoe_0132  binding-protein-dependent transport systems inner membrane component  41.48 
 
 
300 aa  195  7e-49  Conexibacter woesei DSM 14684  Bacteria  normal  0.765267  normal 
 
 
-
 
NC_011146  Gbem_2642  binding-protein-dependent transport systems inner membrane component  41.44 
 
 
280 aa  195  8.000000000000001e-49  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1435  peptide ABC transporter, permease protein  40.3 
 
 
282 aa  194  1e-48  Geobacter sulfurreducens PCA  Bacteria  normal  0.557175  n/a   
 
 
-
 
NC_012918  GM21_1592  binding-protein-dependent transport systems inner membrane component  40.93 
 
 
280 aa  194  1e-48  Geobacter sp. M21  Bacteria  n/a    normal  0.961775 
 
 
-
 
NC_012793  GWCH70_0481  binding-protein-dependent transport systems inner membrane component  38.06 
 
 
299 aa  193  3e-48  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.00209608  n/a   
 
 
-
 
NC_012917  PC1_3865  binding-protein-dependent transport systems inner membrane component  38.75 
 
 
307 aa  192  4e-48  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_0448  binding-protein-dependent transport systems inner membrane component  36.33 
 
 
287 aa  192  6e-48  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.144364 
 
 
-
 
NC_013421  Pecwa_4042  binding-protein-dependent transport systems inner membrane component  38.38 
 
 
307 aa  191  9e-48  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_2716  binding-protein-dependent transport systems inner membrane component  36.49 
 
 
301 aa  191  9e-48  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_2052  binding-protein-dependent transport systems inner membrane component  41.04 
 
 
280 aa  191  1e-47  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_2849  binding-protein-dependent transport systems inner membrane component  40.67 
 
 
304 aa  191  1e-47  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_2013  binding-protein-dependent transport systems inner membrane component  40.65 
 
 
285 aa  191  2e-47  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1236  binding-protein dependent transport system inner membrane protein  41.06 
 
 
284 aa  190  2.9999999999999997e-47  Geobacter metallireducens GS-15  Bacteria  normal  0.143707  normal  0.209567 
 
 
-
 
NC_004578  PSPTO_3250  dipeptide ABC transporter, permease protein DppC, putative  37.2 
 
 
301 aa  189  4e-47  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.193894  n/a   
 
 
-
 
NC_013743  Htur_2407  binding-protein-dependent transport systems inner membrane component  41.73 
 
 
309 aa  189  4e-47  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_007912  Sde_2030  oligopeptide ABC transporter permease protein  37.36 
 
 
293 aa  189  5e-47  Saccharophagus degradans 2-40  Bacteria  normal  0.0128641  normal 
 
 
-
 
NC_011004  Rpal_1408  binding-protein-dependent transport systems inner membrane component  39.16 
 
 
296 aa  189  5e-47  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0788732  n/a   
 
 
-
 
NC_012912  Dd1591_3369  binding-protein-dependent transport systems inner membrane component  38.6 
 
 
301 aa  188  8e-47  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_2704  binding-protein-dependent transport systems inner membrane component  37.13 
 
 
301 aa  188  9e-47  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_0261  binding-protein-dependent transport systems inner membrane component  38.83 
 
 
276 aa  188  1e-46  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_1504  binding-protein-dependent transport systems inner membrane component  38.76 
 
 
289 aa  187  1e-46  Chelativorans sp. BNC1  Bacteria  normal  0.109416  n/a   
 
 
-
 
NC_014212  Mesil_2589  binding-protein-dependent transport systems inner membrane component  43.87 
 
 
280 aa  187  1e-46  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A1919  binding-protein dependent transport system inner membrane protein  39.39 
 
 
310 aa  187  2e-46  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.307176  n/a   
 
 
-
 
NC_011769  DvMF_0921  binding-protein-dependent transport systems inner membrane component  43.45 
 
 
284 aa  187  2e-46  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.399737 
 
 
-
 
NC_011883  Ddes_1030  nickel transporter permease NikC  40.89 
 
 
270 aa  187  2e-46  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.503674  n/a   
 
 
-
 
NC_011661  Dtur_0860  binding-protein-dependent transport systems inner membrane component  37 
 
 
287 aa  186  5e-46  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.000000642732  n/a   
 
 
-
 
NC_010505  Mrad2831_5081  binding-protein-dependent transport systems inner membrane component  43.01 
 
 
309 aa  185  8e-46  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.805329  normal  0.0512458 
 
 
-
 
NC_013757  Gobs_0312  binding-protein-dependent transport systems inner membrane component  39.39 
 
 
313 aa  185  9e-46  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_3241  binding-protein-dependent transport systems inner membrane component  39.33 
 
 
300 aa  184  1.0000000000000001e-45  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009667  Oant_0628  binding-protein-dependent transport systems inner membrane component  37.17 
 
 
294 aa  184  2.0000000000000003e-45  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.881682  n/a   
 
 
-
 
NC_012791  Vapar_3005  binding-protein-dependent transport systems inner membrane component  37.87 
 
 
306 aa  184  2.0000000000000003e-45  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_1137  binding-protein-dependent transport systems inner membrane component  37.31 
 
 
293 aa  184  2.0000000000000003e-45  Dictyoglomus turgidum DSM 6724  Bacteria  unclonable  0.0000000000296229  n/a   
 
 
-
 
NC_007802  Jann_4129  binding-protein-dependent transport systems inner membrane component  39.62 
 
 
312 aa  184  2.0000000000000003e-45  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_007494  RSP_3233  ABC peptide transporter, inner membrane subunit  38.46 
 
 
300 aa  183  3e-45  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009050  Rsph17029_3971  binding-protein-dependent transport systems inner membrane component  38.46 
 
 
300 aa  183  3e-45  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_3861  binding-protein-dependent transport systems inner membrane component  40.83 
 
 
359 aa  182  4.0000000000000006e-45  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.61209  hitchhiker  0.00385009 
 
 
-
 
NC_009436  Ent638_1326  binding-protein-dependent transport systems inner membrane component  38.46 
 
 
303 aa  182  5.0000000000000004e-45  Enterobacter sp. 638  Bacteria  normal  normal  0.999371 
 
 
-
 
NC_009767  Rcas_3840  binding-protein-dependent transport systems inner membrane component  39.47 
 
 
298 aa  182  5.0000000000000004e-45  Roseiflexus castenholzii DSM 13941  Bacteria  decreased coverage  0.00781305  normal  0.217965 
 
 
-
 
NC_008751  Dvul_0778  binding-protein-dependent transport systems inner membrane component  41.33 
 
 
300 aa  182  7e-45  Desulfovibrio vulgaris DP4  Bacteria  normal  0.0620007  normal  0.517219 
 
 
-
 
NC_008781  Pnap_3831  binding-protein-dependent transport systems inner membrane component  38.78 
 
 
308 aa  182  9.000000000000001e-45  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.810845 
 
 
-
 
NC_010623  Bphy_4006  binding-protein-dependent transport systems inner membrane component  36.64 
 
 
304 aa  181  1e-44  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_2594  oligopeptide ABC transporter, permease protein  40.4 
 
 
285 aa  181  1e-44  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_2972  binding-protein-dependent transport systems inner membrane component  39.22 
 
 
301 aa  180  2.9999999999999997e-44  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2624  binding-protein-dependent transport systems inner membrane component  40.15 
 
 
290 aa  180  2.9999999999999997e-44  Dickeya dadantii Ech703  Bacteria  normal  0.118139  n/a   
 
 
-
 
NC_008786  Veis_4593  binding-protein-dependent transport systems inner membrane component  37.13 
 
 
308 aa  180  2.9999999999999997e-44  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_011883  Ddes_1215  binding-protein-dependent transport systems inner membrane component  38.33 
 
 
278 aa  179  2.9999999999999997e-44  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_1865  binding-protein-dependent transport systems inner membrane component  41.3 
 
 
293 aa  180  2.9999999999999997e-44  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.498595  normal  0.124363 
 
 
-
 
NC_010625  Bphy_6649  binding-protein-dependent transport systems inner membrane component  37.8 
 
 
294 aa  179  4e-44  Burkholderia phymatum STM815  Bacteria  normal  0.789298  normal 
 
 
-
 
NC_013216  Dtox_0539  binding-protein-dependent transport systems inner membrane component  40.23 
 
 
330 aa  179  4e-44  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.540099 
 
 
-
 
NC_012917  PC1_4111  binding-protein-dependent transport systems inner membrane component  38.11 
 
 
299 aa  179  4.999999999999999e-44  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.553979  n/a   
 
 
-
 
NC_007796  Mhun_0212  binding-protein-dependent transport systems inner membrane component  34.32 
 
 
292 aa  179  4.999999999999999e-44  Methanospirillum hungatei JF-1  Archaea  decreased coverage  0.000142566  normal 
 
 
-
 
NC_009972  Haur_1899  binding-protein-dependent transport systems inner membrane component  33.58 
 
 
297 aa  179  5.999999999999999e-44  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2848  ABC transporter permease protein  38.01 
 
 
276 aa  179  5.999999999999999e-44  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_4400  binding-protein-dependent transport systems inner membrane component  38.11 
 
 
299 aa  179  5.999999999999999e-44  Pectobacterium wasabiae WPP163  Bacteria  normal  0.111328  n/a   
 
 
-
 
NC_009429  Rsph17025_3965  hypothetical protein  38.41 
 
 
300 aa  178  7e-44  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.16334 
 
 
-
 
NC_010718  Nther_2788  binding-protein-dependent transport systems inner membrane component  34.89 
 
 
310 aa  178  8e-44  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_1103  binding-protein-dependent transport systems inner membrane component  37.17 
 
 
277 aa  178  8e-44  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_0923  binding-protein-dependent transport systems inner membrane component  40 
 
 
308 aa  178  9e-44  Pseudomonas putida GB-1  Bacteria  normal  0.848897  normal 
 
 
-
 
NC_012917  PC1_1493  binding-protein-dependent transport systems inner membrane component  37.17 
 
 
301 aa  178  1e-43  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_1601  binding-protein-dependent transporter inner membrane component  43.36 
 
 
278 aa  178  1e-43  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_0144  binding-protein-dependent transport systems inner membrane component  37.73 
 
 
298 aa  177  1e-43  Dickeya dadantii Ech703  Bacteria  normal  0.0407535  n/a   
 
 
-
 
NC_009049  Rsph17029_2463  binding-protein-dependent transport systems inner membrane component  38.24 
 
 
300 aa  178  1e-43  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.342595  normal  0.319214 
 
 
-
 
NC_009668  Oant_3090  binding-protein-dependent transport systems inner membrane component  39.34 
 
 
310 aa  177  1e-43  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_00799  predicted peptide transporter subunit: membrane component of ABC superfamily  36.01 
 
 
303 aa  177  2e-43  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_2810  binding-protein-dependent transport systems inner membrane component  36.01 
 
 
303 aa  177  2e-43  Escherichia coli DH1  Bacteria  normal  0.482593  n/a   
 
 
-
 
NC_012912  Dd1591_1796  binding-protein-dependent transport systems inner membrane component  40.7 
 
 
286 aa  177  2e-43  Dickeya zeae Ech1591  Bacteria  normal  0.15122  n/a   
 
 
-
 
NC_004311  BRA1093  peptide ABC transporter, permease protein, putative  40.91 
 
 
296 aa  177  2e-43  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_007493  RSP_0805  ABC dipeptide transporter, inner membrane subunit DppC  37.87 
 
 
300 aa  177  2e-43  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_2812  binding-protein-dependent transport systems inner membrane component  35.66 
 
 
303 aa  177  2e-43  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_012892  B21_00816  hypothetical protein  36.01 
 
 
303 aa  177  2e-43  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_0036  binding-protein-dependent transport systems inner membrane component  39.18 
 
 
305 aa  177  2e-43  Ruegeria sp. TM1040  Bacteria  normal  0.0186771  normal  0.317689 
 
 
-
 
NC_013216  Dtox_0370  nickel ABC transporter, permease subunit NikC  36.3 
 
 
284 aa  177  2e-43  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_3715  peptide ABC transporter membrane protein  39.71 
 
 
290 aa  177  2e-43  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009668  Oant_3739  binding-protein-dependent transport systems inner membrane component  34.83 
 
 
300 aa  177  3e-43  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.146994  n/a   
 
 
-
 
NC_009801  EcE24377A_0903  glutathione ABC transporter, permease protein GsiD  35.66 
 
 
303 aa  177  3e-43  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_007355  Mbar_A3674  oligopeptide ABC transporter, permease  37.5 
 
 
279 aa  176  3e-43  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal  0.0467802 
 
 
-
 
NC_012880  Dd703_0951  binding-protein-dependent transport systems inner membrane component  41.32 
 
 
275 aa  176  3e-43  Dickeya dadantii Ech703  Bacteria  normal  0.24114  n/a   
 
 
-
 
NC_011353  ECH74115_0983  glutathione ABC transporter, permease protein GsiD  35.66 
 
 
303 aa  177  3e-43  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal  0.631876 
 
 
-
 
NC_010658  SbBS512_E2516  glutathione ABC transporter, permease protein GsiD  35.66 
 
 
303 aa  177  3e-43  Shigella boydii CDC 3083-94  Bacteria  normal  0.245881  n/a   
 
 
-
 
NC_007958  RPD_4025  binding-protein-dependent transport systems inner membrane component  36.5 
 
 
296 aa  176  4e-43  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.946675 
 
 
-
 
NC_007963  Csal_0210  binding-protein-dependent transport systems inner membrane component  38.21 
 
 
282 aa  176  4e-43  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.980051  n/a   
 
 
-
 
NC_010498  EcSMS35_0857  glutathione ABC transporter, permease protein GsiD  36.43 
 
 
303 aa  176  4e-43  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>