Gene Haur_1899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_1899 
Symbol 
ID5733788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp2291945 
End bp2292838 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content51% 
IMG OID641279043 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001544670 
Protein GI159898423 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGTTA ATCAGCTTTC ACAACCCACA GCCCAAGAGG AGCTTCCGGT AGCGGAATCG 
CTGCTCAAGG TGTTTTGGCG GCGCTATCGC CGCAATGCTA TGGCTTTGGT TGGCTTAGTT
TTAGTCATTA TCTTTGTCAT CCTAGCCATT TTTGCCCCTT GGATTGCCCC ATACCACTAT
AACGATCAGA ATCTGGCTGC AACGTGGCAA AAGCCTTCCA GTACCTATTG GTTTGGAACT
GATGATGTTG GCCGTGATCA ATTGAGCCGG ATTATTTATG CGGTGCGCAC TGCGGCAATT
GTTGGCTTGG GCACATCGAT TCTATCCTTA ATAATCGGGG CGGCGATTGG CTCGGTCTCA
GGTATGCGCG GTGGCTTAAC CGACACCTTT TTGATGCGCT TAGTTGAGAT TTTCAATTCG
TTTCCTTCGA CCTTGTTGGC GATTATTTTG GCGACGACGC TCGGCCAAAA AGTAACCACG
ATTGTGATTG CGTTGGCGAT TACTAACTGG GCGGGCTATG CTCGGTTGAT TCGTGGCCAA
GTGCTTTCGT TGAAAAATCA GGAATATGTG CAGGCCGCCC GCACGCTGGG GGCGAGCGAA
TGGCACATCA TTACCAAATA TGTGTTGCCC AACATTCTTG GCCCAATCGC GGTGGCGCTG
AGCTTTGGGA TTCCCTATGC CATGGTTGCC GAGGCTGGGC TTTCGGTAAT TGGGGTTGGG
ATTCGACCAC CAGAGCCATC GTGGGGCAAC TTGATTAACT TGGGGATTAG CAAAATGCGC
GGCTTCCCGC ACTTAGCCGT TTGGCCAACC CTTTTGTTTA GCATCACGCT ATTAGCCTTT
ACGTGGTTTG GCGATGGCTT GCAAGAAATC TTCAACACGA AAGGGGAACG CTAA
 
Protein sequence
MAVNQLSQPT AQEELPVAES LLKVFWRRYR RNAMALVGLV LVIIFVILAI FAPWIAPYHY 
NDQNLAATWQ KPSSTYWFGT DDVGRDQLSR IIYAVRTAAI VGLGTSILSL IIGAAIGSVS
GMRGGLTDTF LMRLVEIFNS FPSTLLAIIL ATTLGQKVTT IVIALAITNW AGYARLIRGQ
VLSLKNQEYV QAARTLGASE WHIITKYVLP NILGPIAVAL SFGIPYAMVA EAGLSVIGVG
IRPPEPSWGN LINLGISKMR GFPHLAVWPT LLFSITLLAF TWFGDGLQEI FNTKGER