Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_1899 |
Symbol | |
ID | 5733788 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 2291945 |
End bp | 2292838 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641279043 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001544670 |
Protein GI | 159898423 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGTTA ATCAGCTTTC ACAACCCACA GCCCAAGAGG AGCTTCCGGT AGCGGAATCG CTGCTCAAGG TGTTTTGGCG GCGCTATCGC CGCAATGCTA TGGCTTTGGT TGGCTTAGTT TTAGTCATTA TCTTTGTCAT CCTAGCCATT TTTGCCCCTT GGATTGCCCC ATACCACTAT AACGATCAGA ATCTGGCTGC AACGTGGCAA AAGCCTTCCA GTACCTATTG GTTTGGAACT GATGATGTTG GCCGTGATCA ATTGAGCCGG ATTATTTATG CGGTGCGCAC TGCGGCAATT GTTGGCTTGG GCACATCGAT TCTATCCTTA ATAATCGGGG CGGCGATTGG CTCGGTCTCA GGTATGCGCG GTGGCTTAAC CGACACCTTT TTGATGCGCT TAGTTGAGAT TTTCAATTCG TTTCCTTCGA CCTTGTTGGC GATTATTTTG GCGACGACGC TCGGCCAAAA AGTAACCACG ATTGTGATTG CGTTGGCGAT TACTAACTGG GCGGGCTATG CTCGGTTGAT TCGTGGCCAA GTGCTTTCGT TGAAAAATCA GGAATATGTG CAGGCCGCCC GCACGCTGGG GGCGAGCGAA TGGCACATCA TTACCAAATA TGTGTTGCCC AACATTCTTG GCCCAATCGC GGTGGCGCTG AGCTTTGGGA TTCCCTATGC CATGGTTGCC GAGGCTGGGC TTTCGGTAAT TGGGGTTGGG ATTCGACCAC CAGAGCCATC GTGGGGCAAC TTGATTAACT TGGGGATTAG CAAAATGCGC GGCTTCCCGC ACTTAGCCGT TTGGCCAACC CTTTTGTTTA GCATCACGCT ATTAGCCTTT ACGTGGTTTG GCGATGGCTT GCAAGAAATC TTCAACACGA AAGGGGAACG CTAA
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Protein sequence | MAVNQLSQPT AQEELPVAES LLKVFWRRYR RNAMALVGLV LVIIFVILAI FAPWIAPYHY NDQNLAATWQ KPSSTYWFGT DDVGRDQLSR IIYAVRTAAI VGLGTSILSL IIGAAIGSVS GMRGGLTDTF LMRLVEIFNS FPSTLLAIIL ATTLGQKVTT IVIALAITNW AGYARLIRGQ VLSLKNQEYV QAARTLGASE WHIITKYVLP NILGPIAVAL SFGIPYAMVA EAGLSVIGVG IRPPEPSWGN LINLGISKMR GFPHLAVWPT LLFSITLLAF TWFGDGLQEI FNTKGER
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