| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_0805 |
|---|
| Symbol | DppC |
|---|
| ID | 3718423 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007493 |
|---|
| Strand | - |
|---|
| Start bp | 2548893 |
|---|
| End bp | 2549795 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640072026 |
|---|
| Product | ABC dipeptide transporter, inner membrane subunit DppC |
|---|
| Protein accession | YP_353885 |
|---|
| Protein GI | 77464381 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGGA CCGAATGGCT CCTCACGGAA GAGCCCGCCT CGCGCCGGCA GGCGCGGCTG
GGCCAGGCCT ACCGCACCTG GCTCGCGCTG AGGGCCAACC GGCTCGCCAT GGTGGGGCTG
GGCCTCGTGC TGGCACTGAT CGCGGTGGCG ATCCTCGCGC CCTGGATCGC GCCCCACGAT
CCGATCGTGG GCGGCGATCT GCGCACCGAG CGGCTGCTGC CCCCCTCGTG GGCGCATCCG
ATGGGCACCG ACGATCTGGC GCGTGACATC CTGAGCCGGG TGATCCACGG CTCGCGGCTC
ACGCTCATGG TCGTGGGGCT GGTGGCGGTG ATCGCCACGC CCATCGGCCT CGCCATCGGC
ACGACGGCGG GCTATTTCGG CGGCTGGGTC GATACGGTGC TGATGCGGGC GACCGACATC
TTCCTCGCCT TCCCGCGGCT GATCCTGGCG CTGGCCTTCG TCGCGGCGCT CGGGCCGGGG
ATCGAGAATG CGATCATCGC CATCGCGCTC ACCTCCTGGC CGCCCTACGC CCGCCTCGCG
CGGGCCGAGA CGCTCACCAT CCGCGACAGC GACTTCATCA ATGCCGCGCG GCTTCAGGGC
GCCTCCGCCC CCCGCATCCT CTGGGGCCAT GTGACCCCGC TCTGCCTCTC CTCGGTGATC
GTGCGGGTAA CGCTCGACAT GGCGGGGATC ATCCTGACCG CAGCGGGCCT GGGCTTCCTC
GGCCTCGGCG CGCAGCCGCC GCAGCCCGAA TGGGGCGCCA TGATCGCGGG CGGCCGCCGC
TTCATCATCG ACCAGTGGTG GGTCGCCACC ATGCCCGGTC TCGCCATCTT CGCCGTCTCG
CTCGGCTTCA ACCTCTTGGG CGACGGGCTG CGCGACGTGC TCGACCCGAA GGCCCGCAAA
TGA
|
|---|
| Protein sequence | MTRTEWLLTE EPASRRQARL GQAYRTWLAL RANRLAMVGL GLVLALIAVA ILAPWIAPHD
PIVGGDLRTE RLLPPSWAHP MGTDDLARDI LSRVIHGSRL TLMVVGLVAV IATPIGLAIG
TTAGYFGGWV DTVLMRATDI FLAFPRLILA LAFVAALGPG IENAIIAIAL TSWPPYARLA
RAETLTIRDS DFINAARLQG ASAPRILWGH VTPLCLSSVI VRVTLDMAGI ILTAAGLGFL
GLGAQPPQPE WGAMIAGGRR FIIDQWWVAT MPGLAIFAVS LGFNLLGDGL RDVLDPKARK
|
|---|
| |